RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 FBXO11Q86XK2 927 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.83
THBS3-210ENST00000541576 ZNF280CQ8ND82 737 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 CUL5Q93034 780 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.83
THBS3-210ENST00000541576 BIN2Q9UBW5 565 aaPredicted RBP9.9□□□□□ -0.83
THBS3-210ENST00000541576 NDUFA8P51970 172 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 MRPL12P52815 198 aaKnown RBP9.89□□□□□ -0.83
THBS3-210ENST00000541576 INF2Q27J81 1249 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 JAKMIP3Q5VZ66 844 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 SHC4Q6S5L8 630 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 PNMA8AQ86V59 439 aaPredicted RBP9.89□□□□□ -0.83
THBS3-210ENST00000541576 KIFC2Q96AC6 838 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 GLT8D2Q9H1C3 349 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 PSTPIP2Q9H939 334 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 DDX19AQ9NUU7 478 aaKnown RBP9.89□□□□□ -0.83
THBS3-210ENST00000541576 ZHX2Q9Y6X8 837 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 POTECB2RU33 542 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 CMA1P23946 247 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 BACE1P56817 501 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 NONOQ15233 471 aaKnown RBP eCLIP9.89□□□□□ -0.83
THBS3-210ENST00000541576 FMR1NBQ8N0W7 255 aaPredicted RBP9.89□□□□□ -0.83
THBS3-210ENST00000541576 NUP62CLQ9H1M0 184 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
THBS3-210ENST00000541576 FBXO2Q9UK22 296 aaPredicted RBP9.89□□□□□ -0.83
THBS3-210ENST00000541576 CUTAO60888 179 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 PTPREP23469 700 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 NF2P35240 595 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 MAP3K9P80192 1104 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 USH1GQ495M9 461 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 FBXO28Q9NVF7 368 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 MORC2Q9Y6X9 1032 aaPredicted RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 LETM1O95202 739 aaPredicted RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 VCAM1P19320 739 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 MCM7P33993 719 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 TRAF1Q13077 416 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 DGKZQ13574 1117 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 PPP1R9BQ96SB3 815 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 RANBP17Q9H2T7 1088 aaKnown RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 EMILIN3Q9NT22 766 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 TMEM260Q9NX78 707 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 WDR90Q96KV7 1748 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 IREB2P48200 963 aaKnown RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 PTGDRQ13258 359 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 VGLL4Q14135 290 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 UBE2SQ16763 222 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 SPECC1Q5M775 1068 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 CKAP2LQ8IYA6 745 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 SLF1Q9BQI6 1058 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 TANGO6Q9C0B7 1094 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 TTC12Q9H892 705 aaPredicted RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 SRPRBQ9Y5M8 271 aaKnown RBP9.88□□□□□ -0.83
THBS3-210ENST00000541576 CSADQ9Y600 493 aa9.88□□□□□ -0.83
THBS3-210ENST00000541576 KINO60870 393 aaKnown RBP9.87□□□□□ -0.83
THBS3-210ENST00000541576 ATP2C1P98194 919 aaPredicted RBP9.87□□□□□ -0.83
THBS3-210ENST00000541576 CCDC174Q6PII3 467 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 TBCKQ8TEA7 893 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 FUCA2Q9BTY2 467 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 TNMDQ9H2S6 317 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
THBS3-210ENST00000541576 C19orf81C9J6K1 198 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 PFKFB1P16118 471 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 CLK2P49760 499 aaKnown RBP9.87□□□□□ -0.83
THBS3-210ENST00000541576 HMGCS2P54868 508 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 RESP18Q5W5W9 173 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 NEK8Q86SG6 692 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 PRPF38AQ8NAV1 312 aaKnown RBP9.87□□□□□ -0.83
THBS3-210ENST00000541576 FERMT2Q96AC1 680 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 CLEC11AQ9Y240 323 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 ZKSCAN5Q9Y2L8 839 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 SNCAIPQ9Y6H5 919 aa9.87□□□□□ -0.83
THBS3-210ENST00000541576 FLOT1O75955 427 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 TAL1P17542 331 aaPredicted RBP9.86□□□□□ -0.83
THBS3-210ENST00000541576 TTLL12Q14166 644 aaPredicted RBP9.86□□□□□ -0.83
THBS3-210ENST00000541576 LETM2Q2VYF4 491 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 RBM43Q6ZSC3 357 aaKnown RBP9.86□□□□□ -0.83
THBS3-210ENST00000541576 C4orf32Q8N8J7 132 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 ZNF579Q8NAF0 562 aaKnown RBP9.86□□□□□ -0.83
THBS3-210ENST00000541576 RPAP3Q9H6T3 665 aaPredicted RBP9.86□□□□□ -0.83
THBS3-210ENST00000541576 HPSEQ9Y251 543 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 PHIPQ8WWQ0 1821 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 MAP3K11Q16584 847 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP17L6PQ6QN14 398 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 USP49Q70CQ1 688 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 C12orf42Q96LP6 360 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 TSPY26PQ9H489 355 aa9.86□□□□□ -0.83
THBS3-210ENST00000541576 AFG3L2Q9Y4W6 797 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms