RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 PLTPP55058 493 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 RASA3Q14644 834 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 PPP2R5EQ16537 467 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 ICE2Q659A1 982 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 FNBP4Q8N3X1 1017 aaPredicted RBP13.21□□□□□ -0.29
EIF3A-203ENST00000541549 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.29
EIF3A-203ENST00000541549 MAGOHBQ96A72 148 aaKnown RBP13.21□□□□□ -0.29
EIF3A-203ENST00000541549 THAP12O43422 761 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 NR1D1P20393 614 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 ZBED6P86452 979 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 TTLL12Q14166 644 aaPredicted RBP13.21□□□□□ -0.29
EIF3A-203ENST00000541549 CCDC13Q8IYE1 715 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 GLT8D2Q9H1C3 349 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 NHEJ1Q9H9Q4 299 aaPredicted RBP13.21□□□□□ -0.29
EIF3A-203ENST00000541549 BTG4Q9NY30 223 aa13.21□□□□□ -0.29
EIF3A-203ENST00000541549 NDC80O14777 642 aa13.21□□□□□ -0.3
EIF3A-203ENST00000541549 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.3
EIF3A-203ENST00000541549 RETREG2Q8NC44 543 aa13.21□□□□□ -0.3
EIF3A-203ENST00000541549 ARPP21Q9UBL0 812 aaPredicted RBP13.21□□□□□ -0.3
EIF3A-203ENST00000541549 SRPRBQ9Y5M8 271 aaKnown RBP13.21□□□□□ -0.3
EIF3A-203ENST00000541549 GNPATO15228 680 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 TROVE2P10155 538 aaKnown RBP eCLIP13.2□□□□□ -0.37e-12■□□□□ 10.4
EIF3A-203ENST00000541549 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 DHX9Q08211 1270 aaKnown RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 ZNF658Q5TYW1 1059 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 TADA2BQ86TJ2 420 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 IRX2Q9BZI1 471 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 CD19P15391 556 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 CYP4A11Q02928 519 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 GSPT2Q8IYD1 628 aaKnown RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 KLHL29Q96CT2 875 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 NFU1Q9UMS0 254 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 ATP7AQ04656 1500 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 SH2B2O14492 632 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 SUN1O94901 812 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 PAGE5Q96GU1 130 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 GBP5Q96PP8 586 aa13.2□□□□□ -0.3
EIF3A-203ENST00000541549 NOVA2Q9UNW9 492 aaKnown RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
EIF3A-203ENST00000541549 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 TCP10Q12799 353 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 PRR16Q569H4 304 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 ARMCX5Q6P1M9 558 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 GDAQ9Y2T3 454 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 I3L4J1 428 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 BAG2O95816 211 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 TAB3Q8N5C8 712 aaPredicted RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 WDR24Q96S15 920 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 CLGNO14967 610 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 NOL3O60936 208 aaKnown RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 TPD52P55327 224 aaPredicted RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 FAM133BQ5BKY9 247 aaKnown RBP13.19□□□□□ -0.3
EIF3A-203ENST00000541549 PPM1KQ8N3J5 372 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 RWDD2AQ9UIY3 292 aa13.19□□□□□ -0.3
EIF3A-203ENST00000541549 NR2F2P24468 414 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 ADD2P35612 726 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 ITIH3Q06033 890 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 SEPT6Q14141 434 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 MESDQ14696 234 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 MAN2A1Q16706 1144 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 MMS22LQ6ZRQ5 1243 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 PSTPIP2Q9H939 334 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 KIF11P52732 1056 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 RASIP1Q5U651 963 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 PHLDB2Q86SQ0 1253 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 ARHGAP42A6NI28 874 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 PGRMC1O00264 195 aaKnown RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 TEX33O43247 280 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 LRCH2Q5VUJ6 765 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 CCDC89Q8N998 374 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 RAB3IPQ96QF0 476 aaPredicted RBP13.18□□□□□ -0.3
EIF3A-203ENST00000541549 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 PLA2R1Q13018 1463 aa13.18□□□□□ -0.3
EIF3A-203ENST00000541549 GEN1Q17RS7 908 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms