RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 TLL1O43897 1013 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 SMPD1P17405 629 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 FSCN1Q16658 493 aaKnown RBP14.15□□□□□ -0.14
COPA-205ENST00000541366 AAK1Q2M2I8 961 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.15□□□□□ -0.14
COPA-205ENST00000541366 SPRED2Q7Z698 418 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 DEFB128Q7Z7B8 93 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 TLK2Q86UE8 772 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 PPP1R13LQ8WUF5 828 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 CHMP4CQ96CF2 233 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 PUS7LQ9H0K6 701 aaKnown RBP14.15□□□□□ -0.14
COPA-205ENST00000541366 C11orf16Q9NQ32 467 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 NYAP2Q9P242 653 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 CLIP2Q9UDT6 1046 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 MYH4Q9Y623 1939 aa14.15□□□□□ -0.14
COPA-205ENST00000541366 IFIT2P09913 472 aaKnown RBP14.14□□□□□ -0.15
COPA-205ENST00000541366 CYP2C9P11712 490 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 TMEM31Q5JXX7 168 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 EEPD1Q7L9B9 569 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 CLASRPQ8N2M8 674 aaKnown RBP14.14□□□□□ -0.15
COPA-205ENST00000541366 FAM133AQ8N9E0 248 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 CHST13Q8NET6 341 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 TRMT13Q9NUP7 481 aaKnown RBP14.14□□□□□ -0.15
COPA-205ENST00000541366 HCN4Q9Y3Q4 1203 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 LRRC37A2A6NM11 1700 aa14.14□□□□□ -0.15
COPA-205ENST00000541366 PRDM1O75626 825 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 TMEM67Q5HYA8 995 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 FBXO16Q8IX29 292 aaPredicted RBP14.13□□□□□ -0.15
COPA-205ENST00000541366 RPUSD2Q8IZ73 545 aaKnown RBP14.13□□□□□ -0.15
COPA-205ENST00000541366 LRRC47Q8N1G4 583 aaKnown RBP14.13□□□□□ -0.15
COPA-205ENST00000541366 ARNTL2Q8WYA1 636 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 DDRGK1Q96HY6 314 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 MKNK2Q9HBH9 465 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
COPA-205ENST00000541366 FBXO40Q9UH90 709 aa14.13□□□□□ -0.15
COPA-205ENST00000541366 MYH7P12883 1935 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 MINDY4BA8MYZ0 360 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
COPA-205ENST00000541366 CABYRO75952 493 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 POU3F3P20264 500 aaPredicted RBP14.12□□□□□ -0.15
COPA-205ENST00000541366 SNAP25P60880 206 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 UBE3CQ15386 1083 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 TAPT1Q6NXT6 567 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 KIF1BPQ96EK5 621 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 PURBQ96QR8 312 aaKnown RBP14.12□□□□□ -0.15
COPA-205ENST00000541366 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
COPA-205ENST00000541366 ACAD9Q9H845 621 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 CD320Q9NPF0 282 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 FEM1BQ9UK73 627 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 TET1Q8NFU7 2136 aa14.12□□□□□ -0.15
COPA-205ENST00000541366 TAP1Q03518 808 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
COPA-205ENST00000541366 HSP90AB4PQ58FF6 505 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 CEP95Q96GE4 821 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 HAUS7Q99871 368 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.11□□□□□ -0.152e-9■□□□□ 9.7
COPA-205ENST00000541366 RNF146Q9NTX7 359 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 ARPP21Q9UBL0 812 aaPredicted RBP14.11□□□□□ -0.15
COPA-205ENST00000541366 ISY1Q9ULR0 285 aaKnown RBP14.11□□□□□ -0.15
COPA-205ENST00000541366 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 ZNF536O15090 1300 aa14.11□□□□□ -0.15
COPA-205ENST00000541366 ASB14A6NK59 587 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 TMEM232C9JQI7 657 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 ATP5JP18859 108 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 GRB10Q13322 594 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 SLFN13Q68D06 897 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 SIRT2Q8IXJ6 389 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 HLA-CQ95604 372 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
COPA-205ENST00000541366 COG5Q9UP83 839 aa14.1□□□□□ -0.15
COPA-205ENST00000541366 ARIH1Q9Y4X5 557 aaPredicted RBP14.1□□□□□ -0.15
COPA-205ENST00000541366 LCTP09848 1927 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 ZEB2O60315 1214 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 LPXNO60711 386 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 BMP3P12645 472 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 ALAS1P13196 640 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 OAZ1P54368 228 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 MUM1L1Q5H9M0 696 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 ALYREFQ86V81 257 aaKnown RBP14.09□□□□□ -0.15
COPA-205ENST00000541366 MKL1Q969V6 931 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 TRERF1Q96PN7 1200 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 EPB41L4AQ9HCS5 686 aaPredicted RBP14.09□□□□□ -0.15
COPA-205ENST00000541366 MTMR4Q9NYA4 1195 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 TNKSO95271 1327 aa14.09□□□□□ -0.15
COPA-205ENST00000541366 GPR37L1O60883 481 aa14.08□□□□□ -0.16
COPA-205ENST00000541366 IQSEC1Q6DN90 963 aa14.08□□□□□ -0.16
COPA-205ENST00000541366 KIAA1211Q6ZU35 1233 aa14.08□□□□□ -0.16
COPA-205ENST00000541366 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.16
COPA-205ENST00000541366 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
COPA-205ENST00000541366 WDFY4Q6ZS81 3184 aa14.08□□□□□ -0.16
COPA-205ENST00000541366 PTPRSQ13332 1948 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 TTLL1O95922 423 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 PFKMP08237 780 aa14.07□□□□□ -0.16
COPA-205ENST00000541366 MYL3P08590 195 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms