RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 SNAPC2Q13487 334 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 SNW1Q13573 536 aaKnown RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 TYW1BQ6NUM6 668 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 FAM160B2Q86V87 743 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 TNFRSF25Q93038 417 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 RANBP17Q9H2T7 1088 aaKnown RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 BRMS1Q9HCU9 246 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 PPP1R9AQ9ULJ8 1098 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 ADAMTS5Q9UNA0 930 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 AGTPBP1Q9UPW5 1226 aa14.28□□□□□ -0.12
SMAD3-204ENST00000540846 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
SMAD3-204ENST00000540846 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 CHURC1Q8WUH1 139 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 PIBF1Q8WXW3 757 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 BRI3BPQ8WY22 251 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 RRP36Q96EU6 259 aaKnown RBP14.27□□□□□ -0.12
SMAD3-204ENST00000540846 SLF1Q9BQI6 1058 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 TANGO6Q9C0B7 1094 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.12
SMAD3-204ENST00000540846 THSD7BQ9C0I4 1608 aa14.27□□□□□ -0.13
SMAD3-204ENST00000540846 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L15C9J2P7 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L13C9JLJ4 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L11C9JVI0 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L18D6R9N7 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L22D6RA61 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L17D6RBQ6 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L19D6RCP7 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L20D6RJB6 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 ZBTB5O15062 677 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CTAGE5O15320 804 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 GTF2A2P52657 109 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 SNAP25P60880 206 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 USP17L24Q0WX57 530 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 GADL1Q6ZQY3 521 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 HOMER1Q86YM7 354 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 FMR1NBQ8N0W7 255 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 PRPF38AQ8NAV1 312 aaKnown RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 REPS2Q8NFH8 660 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 ZNF536O15090 1300 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 PNMA6FA0A0J9YX94 578 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 STXBP3O00186 592 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 KINO60870 393 aaKnown RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 FLOT1O75955 427 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CCDC192P0DO97 292 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CETPP11597 493 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CMA1P23946 247 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CALML3P27482 149 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 DSG3P32926 999 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 APLP1P51693 650 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CAMK4Q16566 473 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 FASTKD5Q7L8L6 764 aaKnown RBP14.26□□□□□ -0.13
SMAD3-204ENST00000540846 KIFC2Q96AC6 838 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 ATG4CQ96DT6 458 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 PTPN18Q99952 460 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CREBZFQ9NS37 354 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 BARHL2Q9NY43 387 aa14.26□□□□□ -0.13
SMAD3-204ENST00000540846 CCL15-CCL14A0A0B4J2E2 113 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 CUTAO60888 179 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 MARCKSP29966 332 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-204ENST00000540846 IKQ13123 557 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-204ENST00000540846 COG2Q14746 738 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 CCL15Q16663 113 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 LBX2Q6XYB7 198 aa14.25□□□□□ -0.13
SMAD3-204ENST00000540846 ASCC2Q9H1I8 757 aaPredicted RBP14.25□□□□□ -0.13
SMAD3-204ENST00000540846 ABT1Q9ULW3 272 aaKnown RBP14.25□□□□□ -0.13
SMAD3-204ENST00000540846 A0A1B0GVL5 298 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 BTBD19C9JJ37 291 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 VWA5AO00534 786 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 ADAMTS3O15072 1205 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 TAL1P17542 331 aaPredicted RBP14.24□□□□□ -0.13
SMAD3-204ENST00000540846 NDUFA8P51970 172 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 TYRO3Q06418 890 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 RNF214Q8ND24 703 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 CCDC148Q8NFR7 591 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 PPP1R9BQ96SB3 815 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 SEC63Q9UGP8 760 aaKnown RBP14.24□□□□□ -0.13
SMAD3-204ENST00000540846 NOL7Q9UMY1 257 aaKnown RBP14.24□□□□□ -0.13
SMAD3-204ENST00000540846 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 HPSEQ9Y251 543 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 SLC45A1Q9Y2W3 748 aa14.24□□□□□ -0.13
SMAD3-204ENST00000540846 FAM205CA6NFA0 338 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 hCG_1984214I3L0E3 225 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 OPLAHO14841 1288 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 PFKFB1P16118 471 aa14.23□□□□□ -0.13
SMAD3-204ENST00000540846 TRAPPC10P48553 1259 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms