RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 TYW1BQ6NUM6 668 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 CSGALNACT2Q8N6G5 542 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 EIF3CQ99613 913 aaKnown RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 CUEDC2Q9H467 287 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
NPC1-202ENST00000540608 MAGEF1Q9HAY2 307 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 AGPAT5Q9NUQ2 364 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 JAG2Q9Y219 1238 aa13.76□□□□□ -0.21
NPC1-202ENST00000540608 SRGAP2O75044 1071 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 RPS8P62241 208 aaKnown RBP13.75□□□□□ -0.21
NPC1-202ENST00000540608 ZBED6P86452 979 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 GRM4Q14833 912 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 SLC10A5Q5PT55 438 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 PTF1AQ7RTS3 328 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 PNMA1Q8ND90 353 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 BICDL2A1A5D9 508 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 TRIM21P19474 475 aaKnown RBP13.75□□□□□ -0.21
NPC1-202ENST00000540608 TBC1D8BQ0IIM8 1120 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 ZBTB9Q96C00 473 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 PLIN2Q99541 437 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
NPC1-202ENST00000540608 MAD2L2Q9UI95 211 aa13.75□□□□□ -0.21
NPC1-202ENST00000540608 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 SYF2O95926 243 aaKnown RBP13.74□□□□□ -0.21
NPC1-202ENST00000540608 CCNE1P24864 410 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 HIBADHP31937 336 aaKnown RBP13.74□□□□□ -0.21
NPC1-202ENST00000540608 CDK17Q00537 523 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 INF2Q27J81 1249 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 TXNRD3Q86VQ6 643 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 FAM114A1Q8IWE2 563 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 P2RX5Q93086 422 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 LACRTQ9GZZ8 138 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 MCM9Q9NXL9 1143 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 KIAA1551Q9HCM1 1747 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 RCCD1A6NED2 376 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 PHACTR2O75167 634 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
NPC1-202ENST00000540608 FIGNQ5HY92 759 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 ANKRD40Q6AI12 368 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 LRRC15Q8TF66 581 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
NPC1-202ENST00000540608 AK8Q96MA6 479 aa13.74□□□□□ -0.21
NPC1-202ENST00000540608 PURBQ96QR8 312 aaKnown RBP13.74□□□□□ -0.21
NPC1-202ENST00000540608 A0A1W2PQJ5 194 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 MYO1CO00159 1063 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 USP17L8P0C7I0 530 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 PPP1R2P41236 205 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 CCDC178Q5BJE1 867 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 SRLQ86TD4 932 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 C7orf25Q9BPX7 421 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 FAM204AQ9H8W3 233 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 BARHL2Q9NY43 387 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 MKRN1Q9UHC7 482 aaKnown RBP13.73□□□□□ -0.21
NPC1-202ENST00000540608 LCMT1Q9UIC8 334 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 HPCAL4Q9UM19 191 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 A0A0U1RQG5 324 aaPredicted RBP13.73□□□□□ -0.21
NPC1-202ENST00000540608 STXBP3O00186 592 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 KLK7P49862 253 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
NPC1-202ENST00000540608 C12orf60Q5U649 245 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 CABP7Q86V35 215 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 ZSCAN29Q8IWY8 852 aaPredicted RBP13.73□□□□□ -0.21
NPC1-202ENST00000540608 COG1Q8WTW3 980 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 CAPZA3Q96KX2 299 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 NLRP3Q96P20 1036 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 TCP11L1Q9NUJ3 509 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 SPATA31A6Q5VVP1 1343 aa13.73□□□□□ -0.21
NPC1-202ENST00000540608 RNF40O75150 1001 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 PDE4DQ08499 809 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 SLC35G1Q2M3R5 365 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 SLC51AQ86UW1 340 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 CNOT6LQ96LI5 555 aaKnown RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 ERGIC2Q96RQ1 377 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 TSGA10Q9BZW7 698 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 TRIM9Q9C026 710 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 RRP15Q9Y3B9 282 aaKnown RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 FLT1P17948 1338 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 CYTH3O43739 400 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 PRPF6O94906 941 aaKnown RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 PLCG1P19174 1290 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 MTIF2P46199 727 aaKnown RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 KIF5AQ12840 1032 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 MIIPQ5JXC2 388 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 CCNI2Q6ZMN8 369 aaPredicted RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 HEATR3Q7Z4Q2 680 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 IQCDQ96DY2 449 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 RNF216Q9NWF9 866 aaPredicted RBP13.72□□□□□ -0.21
NPC1-202ENST00000540608 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
NPC1-202ENST00000540608 VAV2P52735 878 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 STK4Q13043 487 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
NPC1-202ENST00000540608 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms