RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 ARHGAP22Q7Z5H3 698 aa10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 NSUN7Q8NE18 718 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 CPLX3Q8WVH0 158 aa10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 HINFPQ9BQA5 517 aa10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 MMTAG2Q9BU76 263 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-243ENST00000540387 A6NHS1 94 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 E7EVH7 732 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 LIN7AO14910 233 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 IL15P40933 162 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 APBA1Q02410 837 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 RBL2Q08999 1139 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 BLMHQ13867 455 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 TSEN2Q8NCE0 465 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 KCNG4Q8TDN1 519 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 SEC62Q99442 399 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 TSC22D3Q99576 134 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 LLPHQ9BRT6 129 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 CCDC8Q9H0W5 538 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 GOPCQ9HD26 462 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 CNNM1Q9NRU3 951 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 PTPDC1A2A3K4 754 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 ENC1O14682 589 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 SPTLC2O15270 562 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 SRGAP2O75044 1071 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 RNF8O76064 485 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 ZNF18P17022 549 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 PNOCQ13519 176 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 ALS2CLQ60I27 953 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 CRELD2Q6UXH1 353 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 ILDR2Q71H61 639 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 AACSQ86V21 672 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 CAPZA3Q96KX2 299 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 PICK1Q9NRD5 415 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 L3MBTL1Q9Y468 752 aa10.53□□□□□ -0.72
CTNNA1-243ENST00000540387 B4DLN1 442 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 HSF2BPO75031 334 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 CIAO1O76071 339 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 CTDNEP1O95476 244 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 CDC27P30260 824 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 NR1I3Q14994 352 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 LACTB2Q53H82 288 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 MTHFD1LQ6UB35 978 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 MYLK4Q86YV6 388 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 CELF1Q92879 486 aaKnown RBP10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 FAM163AQ96GL9 167 aaPredicted RBP10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 RPGRIP1Q96KN7 1286 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 ZCWPW1Q9H0M4 648 aa10.52□□□□□ -0.72
CTNNA1-243ENST00000540387 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 ATP2C2O75185 946 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 DNAJC8O75937 253 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 ATP4AP20648 1035 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 MDH1P40925 334 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 TIMM10P62072 90 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 EMC10Q5UCC4 262 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 CC2D2BQ6DHV5 1058 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 HIBCHQ6NVY1 386 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 TAX1BP1Q86VP1 789 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 PPFIBP1Q86W92 1011 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 NFE2L3Q9Y4A8 694 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 MROH7-TTC4A0A0A0MT08 1334 aa10.52□□□□□ -0.73
CTNNA1-243ENST00000540387 YEATS4O95619 227 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 KRT14P02533 472 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 NR1D1P20393 614 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 CMA1P23946 247 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 TPP2P29144 1249 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 TNNI3KQ59H18 835 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 GALNT15Q8N3T1 639 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 EHBP1Q8NDI1 1231 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 HELBQ8NG08 1087 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 RBM41Q96IZ5 413 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 ZIM3Q96PE6 472 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 TLR7Q9NYK1 1049 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 SAR1BQ9Y6B6 198 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 FPGT-TNNI3KV9GXZ4 949 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 RTL9Q8NET4 1388 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 SRRM3A6NNA2 597 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 MAFGO15525 162 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 TEX33O43247 280 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 SMIM24O75264 130 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 ATP1A1P05023 1023 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 CKAP4Q07065 602 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 METTL24Q5JXM2 366 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 GORASP1Q9BQQ3 440 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 SLC5A4Q9NY91 659 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 MFAP3LO75121 409 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 UPP2O95045 317 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 BMP6P22004 513 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 SYKP43405 635 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 CTCFP49711 727 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 R3HDM1Q15032 1099 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 LONRF3Q496Y0 759 aa10.51□□□□□ -0.73
CTNNA1-243ENST00000540387 DDX46Q7L014 1031 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms