RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 TTC14Q96N46 770 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 INCENPQ9NQS7 918 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 SZT2Q5T011 3432 aa18■□□□□ 0.47
UBE3B-211ENST00000539843 ZNF213O14771 459 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 HAND2P61296 217 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 C9orf50Q5SZB4 431 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 TLK2Q86UE8 772 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 SMC5Q8IY18 1101 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 TMEM47Q9BQJ4 181 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 SEZ6LQ9BYH1 1024 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 RANBP17Q9H2T7 1088 aaKnown RBP17.99■□□□□ 0.47
UBE3B-211ENST00000539843 CYP39A1Q9NYL5 469 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 LTBP2Q14767 1821 aa17.99■□□□□ 0.47
UBE3B-211ENST00000539843 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 B4DLN1 442 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 ARVCFO00192 962 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 SDSP20132 328 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 NOVP48745 357 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 MRPL12P52815 198 aaKnown RBP17.98■□□□□ 0.47
UBE3B-211ENST00000539843 SNAP25P60880 206 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 FAAP100Q0VG06 881 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 PPIGQ13427 754 aaKnown RBP eCLIP17.98■□□□□ 0.477e-6■■□□□ 12.3
UBE3B-211ENST00000539843 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
UBE3B-211ENST00000539843 IQSEC1Q6DN90 963 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 CCSAPQ6IQ19 270 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-211ENST00000539843 BTNL9Q6UXG8 535 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 FGD4Q96M96 766 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 GPCPD1Q9NPB8 672 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 SMCHD1A6NHR9 2005 aa17.98■□□□□ 0.47
UBE3B-211ENST00000539843 FRMPD2Q68DX3 1309 aaPredicted RBP17.98■□□□□ 0.47
UBE3B-211ENST00000539843 PTPDC1A2A3K4 754 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 MYADML2A6NDP7 307 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 TIMP1P01033 207 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 GPATCH4Q5T3I0 446 aaKnown RBP17.97■□□□□ 0.47
UBE3B-211ENST00000539843 ZNF589Q86UQ0 364 aaPredicted RBP17.97■□□□□ 0.47
UBE3B-211ENST00000539843 TMEM199Q8N511 208 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 FAM161BQ96MY7 647 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 Q9Y3F1 56 aa17.97■□□□□ 0.47
UBE3B-211ENST00000539843 LAMA3Q16787 3333 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 TMEM265A0A087WTH1 108 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 SLC16A2P36021 539 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 FSCN1Q16658 493 aaKnown RBP17.96■□□□□ 0.47
UBE3B-211ENST00000539843 BRDTQ58F21 947 aaPredicted RBP17.96■□□□□ 0.47
UBE3B-211ENST00000539843 MUM1L1Q5H9M0 696 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 KATNBL1Q9H079 304 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 MTIF3Q9H2K0 278 aaKnown RBP17.96■□□□□ 0.47
UBE3B-211ENST00000539843 OSBPL3Q9H4L5 887 aa17.96■□□□□ 0.47
UBE3B-211ENST00000539843 RAD50Q92878 1312 aa17.96■□□□□ 0.46
UBE3B-211ENST00000539843 DLL1O00548 723 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
UBE3B-211ENST00000539843 PDHBP11177 359 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 NKX3-2P78367 333 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 BEX3Q00994 111 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 NUCB1Q02818 461 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 TTBK2Q6IQ55 1244 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 MFSD5Q6N075 450 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
UBE3B-211ENST00000539843 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
UBE3B-211ENST00000539843 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 KIAA1211Q6ZU35 1233 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 EEPD1Q7L9B9 569 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 FBXO16Q8IX29 292 aaPredicted RBP17.95■□□□□ 0.46
UBE3B-211ENST00000539843 KAT14Q9H8E8 782 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 CTNNA3Q9UI47 895 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
UBE3B-211ENST00000539843 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.94■□□□□ 0.46
UBE3B-211ENST00000539843 ADCY6O43306 1168 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 ITGB8P26012 769 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 CDK7P50613 346 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 ZNF543Q08ER8 600 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 BAATQ14032 418 aaPredicted RBP17.94■□□□□ 0.46
UBE3B-211ENST00000539843 IMMTQ16891 758 aaKnown RBP17.94■□□□□ 0.46
UBE3B-211ENST00000539843 RASGRP2Q7LDG7 609 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 DGKHQ86XP1 1220 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
UBE3B-211ENST00000539843 GPHNQ9NQX3 736 aaPredicted RBP17.94■□□□□ 0.46
UBE3B-211ENST00000539843 GNEQ9Y223 722 aaKnown RBP17.94■□□□□ 0.46
UBE3B-211ENST00000539843 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-211ENST00000539843 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-211ENST00000539843 SMPD1P17405 629 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 CALML3P27482 149 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 ALDH5A1P51649 535 aaPredicted RBP17.93■□□□□ 0.46
UBE3B-211ENST00000539843 PDE4DQ08499 809 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 CXCL17Q6UXB2 119 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 TBC1D10CQ8IV04 446 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 FAM126BQ8IXS8 530 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 GUCD1Q96NT3 240 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 POLR3EQ9NVU0 708 aa17.93■□□□□ 0.46
UBE3B-211ENST00000539843 NFIBO00712 420 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 CPT1AP50416 773 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 ITGA7Q13683 1181 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 MORC4Q8TE76 937 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 DSCC1Q9BVC3 393 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
UBE3B-211ENST00000539843 KRT23Q9C075 422 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms