RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 IFT20Q8IY31 132 aa13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 ZNF579Q8NAF0 562 aaKnown RBP13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 MDM1Q8TC05 714 aa13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 NLRP3Q96P20 1036 aa13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 SLC39A2Q9NP94 309 aa13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 CNOT8Q9UFF9 292 aaKnown RBP13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 PXDNQ92626 1479 aa13.54□□□□□ -0.24
PRKCQ-203ENST00000539722 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 LGALS16A8MUM7 142 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 ANP32DO95626 131 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 TRIM58Q8NG06 486 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 PAGR1Q9BTK6 254 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 FAM133BQ5BKY9 247 aaKnown RBP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 BZW1Q7L1Q6 419 aaKnown RBP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 SHISA4Q96DD7 197 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 AATFQ9NY61 560 aaKnown RBP eCLIP13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 CEP131Q9UPN4 1083 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
PRKCQ-203ENST00000539722 RASSF10A6NK89 507 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 LRRC4CQ9HCJ2 640 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 NRXN3Q9Y4C0 1643 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 FTCDO95954 541 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 PAK2Q13177 524 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 TCIRG1Q13488 830 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 RTN1Q16799 776 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 CCDC50Q8IVM0 306 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 RAPGEF5Q92565 580 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 CUL5Q93034 780 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 FAM207AQ9NSI2 230 aaPredicted RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 PCDHA13Q9Y5I0 950 aa13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.52□□□□□ -0.24
PRKCQ-203ENST00000539722 AKR1B10O60218 316 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 DIAPH2O60879 1101 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 FOXO4P98177 505 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 SAAL1Q96ER3 474 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 RBM33Q96EV2 1170 aaKnown RBP13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 IRAK4Q9NWZ3 460 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 EID1Q9Y6B2 187 aa13.52□□□□□ -0.25
PRKCQ-203ENST00000539722 MYO5AQ9Y4I1 1855 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 KLHL33A6NCF5 533 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 GCOM1H8Y6P7 765 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MGRN1O60291 552 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 USO1O60763 962 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 IL15P40933 162 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 RASSF7Q02833 373 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 PTGDRQ13258 359 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 PRCCQ92733 491 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TLR10Q9BXR5 811 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 CPSF2Q9P2I0 782 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 EYA2O00167 538 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TRAPPC3O43617 180 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 IFNAR1P17181 557 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 ZNF507Q8TCN5 953 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 PURBQ96QR8 312 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MAGEC2Q9UBF1 373 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TRPC6Q9Y210 931 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TACC3Q9Y6A5 838 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 SLC4A4Q9Y6R1 1079 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 KDM3BQ7LBC6 1761 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MAP3K15Q6ZN16 1313 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 HMGB1P1B2RPK0 211 aaPredicted RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 EPHB6O15197 1021 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 EIF4A3P38919 411 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 XRCC4Q13426 336 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 DRP2Q13474 957 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 MEA1Q16626 185 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 SPAG5Q96R06 1193 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 PANK4Q9NVE7 773 aa13.51□□□□□ -0.25
PRKCQ-203ENST00000539722 TCP1P17987 556 aaKnown RBP13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 GKAP1Q5VSY0 366 aaPredicted RBP13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 AGAP11Q8TF27 550 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 TATDN2Q93075 761 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 ZNF570Q96NI8 536 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 SH3GL3Q99963 347 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 ARHGAP20Q9P2F6 1191 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 SLIT1O75093 1534 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 CAND2O75155 1236 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 MCM7P33993 719 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 KIF11P52732 1056 aa13.5□□□□□ -0.25
PRKCQ-203ENST00000539722 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms