RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 PDE8AO60658 829 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 KIAA0754O94854 1291 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 FSBPO95073 299 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 HNRNPH3P31942 346 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 MNAT1P51948 309 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 PMS1P54277 932 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 KCNV1Q6PIU1 500 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 YTHDF3Q7Z739 585 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 CCDC155Q8N6L0 562 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 EHD4Q9H223 541 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 SH2D4AQ9H788 454 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 A1CFQ9NQ94 594 aaKnown RBP19.61■□□□□ 0.73
RAB40C-205ENST00000539661 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 DUSP10Q9Y6W6 482 aa19.61■□□□□ 0.73
RAB40C-205ENST00000539661 ANKRD36CQ5JPF3 1778 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 NDUFAB1O14561 156 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 SETQ01105 290 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-205ENST00000539661 TBC1D8BQ0IIM8 1120 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 TROAPQ12815 778 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 TTMPQ5BVD1 217 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 CCDC42Q96M95 316 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 ERGIC2Q96RQ1 377 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 BTG4Q9NY30 223 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 LOC102724159A0A0B4J2E5 919 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 PCP11498 1178 aaKnown RBP19.6■□□□□ 0.73
RAB40C-205ENST00000539661 MCM7P33993 719 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 PWP2Q15269 919 aaKnown RBP19.6■□□□□ 0.73
RAB40C-205ENST00000539661 PIK3AP1Q6ZUJ8 805 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 CNTNAP5Q8WYK1 1306 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 DUOX1Q9NRD9 1551 aa19.6■□□□□ 0.73
RAB40C-205ENST00000539661 hCG_1642624A0A1W2PR95 340 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 BICDL2A1A5D9 508 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 KLRC4O43908 158 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 PPP1R2P41236 205 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 FBXW10Q5XX13 1052 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 HDAC7Q8WUI4 952 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 ALS2CR12Q96Q35 445 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 OSBPL9Q96SU4 736 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 LRWD1Q9UFC0 647 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 LCA5LO95447 670 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 DDR1Q08345 913 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 EZH2Q15910 746 aaKnown RBP19.59■□□□□ 0.73
RAB40C-205ENST00000539661 CCDC96Q2M329 555 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 HAUS3Q68CZ6 603 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 KDM7AQ6ZMT4 941 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 ZSCAN29Q8IWY8 852 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-205ENST00000539661 C4orf32Q8N8J7 132 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 CABS1Q96KC9 395 aa19.59■□□□□ 0.73
RAB40C-205ENST00000539661 MEFVO15553 781 aaPredicted RBP19.58■□□□□ 0.73
RAB40C-205ENST00000539661 PAFAH1B1P43034 410 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 FNTAP49354 379 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 NLRP5P59047 1200 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 IQCA1Q86XH1 822 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 CSGALNACT2Q8N6G5 542 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 OTUD6BQ8N6M0 293 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 TSEN2Q8NCE0 465 aaKnown RBP19.58■□□□□ 0.73
RAB40C-205ENST00000539661 C1orf131Q8NDD1 294 aaKnown RBP19.58■□□□□ 0.73
RAB40C-205ENST00000539661 ARL8AQ96BM9 186 aa19.58■□□□□ 0.73
RAB40C-205ENST00000539661 TACO1Q9BSH4 297 aaKnown RBP19.58■□□□□ 0.73
RAB40C-205ENST00000539661 SRRM3A6NNA2 597 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-205ENST00000539661 CYP27A1Q02318 531 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 CCDC181Q5TID7 509 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 DUSP9Q99956 384 aaKnown RBP19.58■□□□□ 0.72
RAB40C-205ENST00000539661 IFIH1Q9BYX4 1025 aaKnown RBP19.58■□□□□ 0.72
RAB40C-205ENST00000539661 GGA2Q9UJY4 613 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 PLAGL2Q9UPG8 496 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 PCDHA13Q9Y5I0 950 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 RREB1Q92766 1687 aa19.58■□□□□ 0.72
RAB40C-205ENST00000539661 MINDY4BA8MYZ0 360 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 ZNF263O14978 683 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 SCG2P13521 617 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 MAGEF1Q9HAY2 307 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 RNF14Q9UBS8 474 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 CAPN6Q9Y6Q1 641 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 COL5A2P05997 1499 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-205ENST00000539661 IL2RBP14784 551 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 CCNE1P24864 410 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 CALML3P27482 149 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 NAALADL2Q58DX5 795 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 FKBP15Q5T1M5 1219 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 CD302Q8IX05 232 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 KBTBD4Q9NVX7 518 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 SAMM50Q9Y512 469 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 CAPN7Q9Y6W3 813 aa19.57■□□□□ 0.72
RAB40C-205ENST00000539661 MAP2K2P36507 400 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 C8orf74Q6P047 294 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 IFT20Q8IY31 132 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 P2RX5Q93086 422 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 EPN3Q9H201 632 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 CUEDC2Q9H467 287 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 FGRP09769 529 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 GPTP24298 496 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 PDCLQ13371 301 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 PFKFB3Q16875 520 aaPredicted RBP19.56■□□□□ 0.72
RAB40C-205ENST00000539661 MREGQ8N565 214 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 MIGA1Q8NAN2 632 aa19.56■□□□□ 0.72
RAB40C-205ENST00000539661 CCDC47Q96A33 483 aaKnown RBP19.56■□□□□ 0.72
RAB40C-205ENST00000539661 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms