RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 ITIH6Q6UXX5 1313 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 CTAGE9A4FU28 777 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 SLC37A4O43826 429 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 N4BP1O75113 896 aaKnown RBP15.78■□□□□ 0.12
UBE3B-210ENST00000539599 NDUFA10O95299 355 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 TDP2O95551 362 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 BAG3O95817 575 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 HERVK_113P62684 666 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 SHROOM1Q2M3G4 852 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-210ENST00000539599 PCMTD1Q96MG8 357 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-210ENST00000539599 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 RMND1Q9NWS8 449 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 TRAPPC3LQ5T215 181 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 TMTC1Q8IUR5 882 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 SMCR8Q8TEV9 937 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-210ENST00000539599 RABGGTAQ92696 567 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 GDAP1L1Q96MZ0 367 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 TRERF1Q96PN7 1200 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 LACRTQ9GZZ8 138 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 POLLQ9UGP5 575 aa15.78■□□□□ 0.12
UBE3B-210ENST00000539599 EPN1Q9Y6I3 576 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-210ENST00000539599 OR52Z1P0C646 297 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 MRPS25P82663 173 aaKnown RBP15.77■□□□□ 0.12
UBE3B-210ENST00000539599 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
UBE3B-210ENST00000539599 UBE2SQ16763 222 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 KRT26Q7Z3Y9 468 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 ZNF804AQ7Z570 1209 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 ZNF507Q8TCN5 953 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 TUBGCP2Q9BSJ2 902 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 TRIM9Q9C026 710 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 ARFGAP3Q9NP61 516 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 PDS5AQ29RF7 1337 aaKnown RBP15.77■□□□□ 0.12
UBE3B-210ENST00000539599 BTAF1O14981 1849 aa15.77■□□□□ 0.12
UBE3B-210ENST00000539599 LGALS16A8MUM7 142 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 EPHB6O15197 1021 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 RAD21O60216 631 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 ZMYND10O75800 440 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 KIF20AO95235 890 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 ATP1A1P05023 1023 aaKnown RBP15.77■□□□□ 0.11
UBE3B-210ENST00000539599 VSNL1P62760 191 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 LRRC41Q15345 812 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 AMOTL1Q8IY63 956 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 CCDC155Q8N6L0 562 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 KIAA0895Q8NCT3 520 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 GIMAP8Q8ND71 665 aaPredicted RBP15.77■□□□□ 0.11
UBE3B-210ENST00000539599 ANKRD20A12PQ8NF67 263 aa15.77■□□□□ 0.11
UBE3B-210ENST00000539599 DDX60LQ5H9U9 1706 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 H7C1D1 291 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 EDIL3O43854 480 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 SLC16A2P36021 539 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 RHBDL3P58872 404 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 CCDC148Q8NFR7 591 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 RPGRQ92834 1020 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 CNOT6LQ96LI5 555 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 NAPGQ99747 312 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 ABCB6Q9NP58 842 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 SH3GLB2Q9NR46 395 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 LUC7L2Q9Y383 392 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 ZNF185O15231 689 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 RHOBTB3O94955 611 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 NONOQ15233 471 aaKnown RBP eCLIP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 CT47A1Q5JQC4 288 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 TTBK2Q6IQ55 1244 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 KCNK18Q7Z418 384 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 ZMYND12Q9H0C1 365 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 TTF2Q9UNY4 1162 aaKnown RBP15.76■□□□□ 0.11
UBE3B-210ENST00000539599 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
UBE3B-210ENST00000539599 FAM196BA6NMK8 535 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 C6orf229H3BNL8 230 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 PSMA7O14818 248 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 TRIM21P19474 475 aaKnown RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 FECHP22830 423 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 GTF2IP78347 998 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 SPAG1Q07617 926 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 MACROD2A1Z1Q3 448 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 AKR1B1P15121 316 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 RC3H1Q5TC82 1133 aaKnown RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 C16orf86Q6ZW13 317 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 GSPT2Q8IYD1 628 aaKnown RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 OR8K1Q8NGG5 319 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 SEMA6BQ9H3T3 888 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 TCP11L1Q9NUJ3 509 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 EXOC1Q9NV70 894 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 MAST2Q6P0Q8 1798 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 ZBTB22O15209 634 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 TAL1P17542 331 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 MTIF2P46199 727 aaKnown RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 SCNN1DP51172 638 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 CACNB1Q02641 598 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-210ENST00000539599 TBC1D8BQ0IIM8 1120 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 CCDC122Q5T0U0 273 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 PDE11AQ9HCR9 933 aa15.75■□□□□ 0.11
UBE3B-210ENST00000539599 DDX4Q9NQI0 724 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms