RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 MTMR2Q13614 643 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 QRICH1Q2TAL8 776 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 SYDE2Q5VT97 1194 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 ARMC9Q7Z3E5 817 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 HEATR3Q7Z4Q2 680 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 DIS3L2Q8IYB7 885 aaKnown RBP10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 SH3TC2Q8TF17 1288 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 TNFRSF25Q93038 417 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZSCAN16Q9H4T2 348 aaPredicted RBP10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 ELP3Q9H9T3 547 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 PICK1Q9NRD5 415 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 LMBRD1Q9NUN5 540 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 PRR12Q9ULL5 1215 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 AFG3L2Q9Y4W6 797 aa10.56□□□□□ -0.72
RTN4IP1-204ENST00000539449 PNMA6FA0A0J9YX94 578 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 PPP1R12BO60237 982 aaPredicted RBP10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 GADD45BO75293 160 aaPredicted RBP10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 PRPF40AO75400 957 aaKnown RBP10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 U2AF2P26368 475 aaKnown RBP eCLIP10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 NLRP5P59047 1200 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 TRIM29Q14134 588 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 MAP3K11Q16584 847 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 LDLRAD1Q5T700 205 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZNF280CQ8ND82 737 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 RGS22Q8NE09 1264 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 RASGRP4Q8TDF6 673 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 USP28Q96RU2 1077 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 SH2D4AQ9H788 454 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 BARHL2Q9NY43 387 aa10.55□□□□□ -0.72
RTN4IP1-204ENST00000539449 M0R2N6 131 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 WNT7AO00755 349 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZBTB5O15062 677 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 FIBPO43427 364 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZBTB48P10074 688 aaPredicted RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 VCAM1P19320 739 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 NCLP19338 710 aaKnown RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 KRT2P35908 639 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 GJA5P36382 358 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 IREB2P48200 963 aaKnown RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 TOB1P50616 345 aaPredicted RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 HMGCS2P54868 508 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 NAPAP54920 295 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 BACE1P56817 501 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 CEBPZQ03701 1054 aaKnown RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 CDC37Q16543 378 aaPredicted RBP10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 TTC28Q96AY4 2481 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 SH3GLB2Q9NR46 395 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 CLIC4Q9Y696 253 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 LOC285556D6RIA3 1793 aa10.54□□□□□ -0.72
RTN4IP1-204ENST00000539449 SMCO2A6NFE2 343 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 WDR46O15213 610 aaKnown RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 IKQ13123 557 aaPredicted RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 BLIDQ8IZY5 108 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 LEO1Q8WVC0 666 aaPredicted RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 KIFC2Q96AC6 838 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 SLC10A4Q96EP9 437 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 WNK4Q96J92 1243 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 C12orf42Q96LP6 360 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 FOXP1Q9H334 677 aaPredicted RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 RPAP3Q9H6T3 665 aaPredicted RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 TMEM260Q9NX78 707 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 SEC63Q9UGP8 760 aaKnown RBP10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 FEM1BQ9UK73 627 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 PCDHA4Q9UN74 947 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 ATP6V1DQ9Y5K8 247 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 ZSWIM8A7E2V4 1837 aa10.53□□□□□ -0.72
RTN4IP1-204ENST00000539449 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.72
RTN4IP1-204ENST00000539449 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 C19orf81C9J6K1 198 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 PLA2G6O60733 806 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 XBP1P17861 261 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 STAT2P52630 851 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 TPRNQ4KMQ1 711 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 SH3D19Q5HYK7 790 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 CCDC174Q6PII3 467 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 BRAPQ7Z569 592 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 NOSTRINQ8IVI9 506 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 TMEM87AQ8NBN3 555 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 DAGLBQ8NCG7 672 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 CHURC1Q8WUH1 139 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 ZMYND12Q9H0C1 365 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 BIN2Q9UBW5 565 aaPredicted RBP10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 RCOR1Q9UKL0 485 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 PCDHA6Q9UN73 950 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 PCDHA8Q9Y5H6 950 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 CSADQ9Y600 493 aa10.52□□□□□ -0.73
RTN4IP1-204ENST00000539449 OPLAHO14841 1288 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms