RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.7□□□□□ -0.7
MRE11-208ENST00000538923 ARMT1Q9H993 441 aa10.7□□□□□ -0.7
MRE11-208ENST00000538923 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
MRE11-208ENST00000538923 DOCK3Q8IZD9 2030 aa10.7□□□□□ -0.7
MRE11-208ENST00000538923 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 MBD4O95243 580 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 RARBP10826 455 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 ADD2P35612 726 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 TMEM132BQ14DG7 1078 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 SHHQ15465 462 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 FAM47AQ5JRC9 791 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 LIAT1Q6ZQX7 453 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 PANK1Q8TE04 598 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 BADQ92934 168 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 KANSL2Q9H9L4 492 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 XPNPEP3Q9NQH7 507 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 PDLIM7Q9NR12 457 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 EVA1BQ9NVM1 165 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 PAG1Q9NWQ8 432 aa10.69□□□□□ -0.7
MRE11-208ENST00000538923 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 PRKAB2O43741 272 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 EEF2P13639 858 aaKnown RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 COPB2P35606 906 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 CDK8P49336 464 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 SMAD3P84022 425 aaKnown RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 KCNH2Q12809 1159 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 KCTD2Q14681 263 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 C12orf60Q5U649 245 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 C16orf86Q6ZW13 317 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 RNF180Q86T96 592 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 CLEC10AQ8IUN9 316 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 FERMT2Q96AC1 680 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 TRIM43Q96BQ3 446 aaPredicted RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 MMP19Q99542 508 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 COL25A1Q9BXS0 654 aaPredicted RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 ADAMTS5Q9UNA0 930 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 PHF24Q9UPV7 400 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 TACC3Q9Y6A5 838 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 V9GY48 417 aaPredicted RBP10.68□□□□□ -0.7
MRE11-208ENST00000538923 UNC80Q8N2C7 3258 aa10.68□□□□□ -0.7
MRE11-208ENST00000538923 A0A0G2JMZ2 1700 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 ROBO3Q96MS0 1386 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 MYH1P12882 1939 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 USP17L21D6R901 530 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 VWA5AO00534 786 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 PGK2P07205 417 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 ATP5JP18859 108 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 RPIAP49247 311 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 UBE3CQ15386 1083 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 C9orf50Q5SZB4 431 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 ZSCAN25Q6NSZ9 544 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 RIOX2Q8IUF8 465 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 LRRN4Q8WUT4 740 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
MRE11-208ENST00000538923 CDX2Q99626 313 aaPredicted RBP10.67□□□□□ -0.7
MRE11-208ENST00000538923 HAUS7Q99871 368 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 TINF2Q9BSI4 451 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 BOLA2Q9H3K6 86 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
MRE11-208ENST00000538923 CYP2D7A0A087X1C5 515 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 CLTBP09497 229 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 AKR1A1P14550 325 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 STAT3P40763 770 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 TLE2Q04725 743 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 ZNF792Q3KQV3 632 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 PTCRAQ6ISU1 281 aaPredicted RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 CTR9Q6PD62 1173 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 SH3RF1Q7Z6J0 888 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 MSL3Q8N5Y2 521 aaKnown RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 CHMP4BQ9H444 224 aaKnown RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 FBXO28Q9NVF7 368 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 ARPP21Q9UBL0 812 aaPredicted RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
MRE11-208ENST00000538923 PPP1R9AQ9ULJ8 1098 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 DDX19BQ9UMR2 479 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 SLC4A4Q9Y6R1 1079 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 NAV1Q8NEY1 1877 aa10.66□□□□□ -0.7
MRE11-208ENST00000538923 FRMPD3Q5JV73 1810 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 ZBED9Q6R2W3 1325 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 A0A1W2PQ45 241 aaPredicted RBP10.65□□□□□ -0.7
MRE11-208ENST00000538923 A0A1W2PQY0 241 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 RAD21O60216 631 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 PGK1P00558 417 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 SLFNL1Q499Z3 407 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 FAM83BQ5T0W9 1011 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 MAFAQ8NHW3 353 aaPredicted RBP10.65□□□□□ -0.7
MRE11-208ENST00000538923 NUP133Q8WUM0 1156 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 RNPC3Q96LT9 517 aaKnown RBP10.65□□□□□ -0.7
MRE11-208ENST00000538923 TSEN34Q9BSV6 310 aaKnown RBP10.65□□□□□ -0.7
MRE11-208ENST00000538923 ZBTB40Q9NUA8 1239 aa10.65□□□□□ -0.7
MRE11-208ENST00000538923 MYO5AQ9Y4I1 1855 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms