RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CLCN1P35523 988 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 TXKP42681 527 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 CCDC12Q8WUD4 166 aaPredicted RBP16.03■□□□□ 0.16
ACTN1-205ENST00000538545 DPF2Q92785 391 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 MKL1Q969V6 931 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
ACTN1-205ENST00000538545 MAPK8IP1Q9UQF2 711 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 BRCA1P38398 1863 aaKnown RBP16.03■□□□□ 0.16
ACTN1-205ENST00000538545 MYH7BA7E2Y1 1941 aa16.03■□□□□ 0.16
ACTN1-205ENST00000538545 SLFN14P0C7P3 912 aa16.02■□□□□ 0.16
ACTN1-205ENST00000538545 DHX8Q14562 1220 aaKnown RBP16.02■□□□□ 0.16
ACTN1-205ENST00000538545 E2F4Q16254 413 aa16.02■□□□□ 0.16
ACTN1-205ENST00000538545 FANCLQ9NW38 375 aa16.02■□□□□ 0.16
ACTN1-205ENST00000538545 IFNKQ9P0W0 207 aa16.02■□□□□ 0.16
ACTN1-205ENST00000538545 SMC2O95347 1197 aa16.02■□□□□ 0.15
ACTN1-205ENST00000538545 CD44P16070 742 aaKnown RBP16.02■□□□□ 0.15
ACTN1-205ENST00000538545 RASA3Q14644 834 aa16.02■□□□□ 0.15
ACTN1-205ENST00000538545 KRT25Q7Z3Z0 450 aa16.02■□□□□ 0.15
ACTN1-205ENST00000538545 NEMFO60524 1076 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
ACTN1-205ENST00000538545 BMP15O95972 392 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 SARSP49591 514 aaKnown RBP16.01■□□□□ 0.15
ACTN1-205ENST00000538545 GMPSP49915 693 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-205ENST00000538545 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 MICALL2Q8IY33 904 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 ZFP91Q96JP5 570 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-205ENST00000538545 XPO4Q9C0E2 1151 aaKnown RBP16.01■□□□□ 0.15
ACTN1-205ENST00000538545 PSTPIP2Q9H939 334 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 DLK2Q6UY11 383 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 FBXO28Q9NVF7 368 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 ZBTB21Q9ULJ3 1066 aa16.01■□□□□ 0.15
ACTN1-205ENST00000538545 POTEMA6NI47 508 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 HOXA13P31271 388 aaPredicted RBP16■□□□□ 0.15
ACTN1-205ENST00000538545 HS1BP3Q53T59 392 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 PDXDC2PQ6P474 469 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 CAVIN2O95810 425 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 DPYDQ12882 1025 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 SH3RF1Q7Z6J0 888 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 TBC1D5Q92609 795 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 OR52Z1P0C646 297 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 BMP3P12645 472 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 MORC3Q14149 939 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 MTMR8Q96EF0 704 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 NUDT12Q9BQG2 462 aa16■□□□□ 0.15
ACTN1-205ENST00000538545 MYO1BO43795 1136 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 STAT6P42226 847 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 GRIPAP1Q4V328 841 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 ARL6IP4Q66PJ3 421 aaKnown RBP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 UPF1Q92900 1129 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 RIC8AQ9NPQ8 531 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 SAMSN1Q9NSI8 373 aaKnown RBP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 UBA7P41226 1012 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 IQUBQ8NA54 791 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 CACTINQ8WUQ7 758 aaKnown RBP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 DCAF4Q8WV16 495 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 PGAP2Q9UHJ9 254 aa15.99■□□□□ 0.15
ACTN1-205ENST00000538545 HERC5Q9UII4 1024 aaKnown RBP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 CNOT7Q9UIV1 285 aaKnown RBP15.99■□□□□ 0.15
ACTN1-205ENST00000538545 GOLGA8FQ08AF8 430 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 GOLGA8DPQ0D2H9 430 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 CUL5Q93034 780 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 KIFC2Q96AC6 838 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 ZBED3Q96IU2 234 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-205ENST00000538545 DISC1Q9NRI5 854 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 PRR12Q9ULL5 1215 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 ESYT2A0FGR8 921 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
ACTN1-205ENST00000538545 MYL5Q02045 173 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 NT5DC1Q5TFE4 455 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 EEF2KMTQ96G04 330 aa15.98■□□□□ 0.15
ACTN1-205ENST00000538545 NAP1L5Q96NT1 182 aaPredicted RBP15.98■□□□□ 0.15
ACTN1-205ENST00000538545 ARFGEF1Q9Y6D6 1849 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 PLCG1P19174 1290 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 CLK2P49760 499 aaKnown RBP15.97■□□□□ 0.15
ACTN1-205ENST00000538545 SARM1Q6SZW1 724 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 SPATA20Q8TB22 786 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
ACTN1-205ENST00000538545 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
ACTN1-205ENST00000538545 NFE2L3Q9Y4A8 694 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 MEIS2O14770 477 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 FANCCQ00597 558 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 CALCRLQ16602 461 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 RRAGBQ5VZM2 374 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 HACL1Q9UJ83 578 aa15.97■□□□□ 0.15
ACTN1-205ENST00000538545 OPLAHO14841 1288 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 CAP2P40123 477 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 UBXN2AP68543 259 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 NBPF12Q5TAG4 269 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-205ENST00000538545 CABP7Q86V35 215 aa15.96■□□□□ 0.15
ACTN1-205ENST00000538545 GMCL1P1Q8NEA9 526 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms