RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 A0A1W2PQJ5 194 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 KLRC4O43908 158 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CPP00450 1065 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 TTC31Q49AM3 519 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CCNI2Q6ZMN8 369 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 BICDL1Q6ZP65 573 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 AMOTL1Q8IY63 956 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 MMGT1Q8N4V1 131 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 GIMAP8Q8ND71 665 aaPredicted RBP13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 PPM1EQ8WY54 764 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 SETDB2Q96T68 719 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 CCSER1Q9C0I3 900 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
CPSF7-218ENST00000537641 TRIM49BA6NDI0 452 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 ENC1O14682 589 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 PHACTR2O75167 634 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 VAV2P52735 878 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 KCNQ4P56696 695 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 TTI2Q6NXR4 508 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 FOXR1Q6PIV2 292 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 BLIDQ8IZY5 108 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 CELF1Q92879 486 aaKnown RBP13.58□□□□□ -0.24
CPSF7-218ENST00000537641 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
CPSF7-218ENST00000537641 FAM84BQ96KN1 310 aaPredicted RBP13.58□□□□□ -0.24
CPSF7-218ENST00000537641 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 SELENOOQ9BVL4 669 aa13.58□□□□□ -0.24
CPSF7-218ENST00000537641 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 LAD1O00515 517 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 ZPR1O75312 459 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 KIF5BP33176 963 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 RPS8P62241 208 aaKnown RBP13.57□□□□□ -0.24
CPSF7-218ENST00000537641 GBP6Q6ZN66 633 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 FBXO33Q7Z6M2 555 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 NBPF5PQ86XG9 351 aaPredicted RBP13.57□□□□□ -0.24
CPSF7-218ENST00000537641 FAM76AQ8TAV0 307 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 AENQ8WTP8 325 aaKnown RBP13.57□□□□□ -0.24
CPSF7-218ENST00000537641 ANKRD2Q9GZV1 360 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 FAM184BQ9ULE4 1060 aa13.57□□□□□ -0.24
CPSF7-218ENST00000537641 GNPATO15228 680 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PRLRP16471 622 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 CCNE1P24864 410 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 NAALADL2Q58DX5 795 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 DTHD1Q6ZMT9 781 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 DAGLBQ8NCG7 672 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 CAPZA3Q96KX2 299 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 NHEJ1Q9H9Q4 299 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 KBTBD4Q9NVX7 518 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PCDHA4Q9UN74 947 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 WTIPA6NIX2 430 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 B4DLN1 442 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 GOLGA8KD6RF30 607 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 IDEP14735 1019 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PRPHP41219 470 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PMS1P54277 932 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 KIF5AQ12840 1032 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PPFIA1Q13136 1202 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 COBLL1Q53SF7 1204 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 GALNT17Q6IS24 598 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 TPTE2Q6XPS3 522 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 TRIM58Q8NG06 486 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 P2RX5Q93086 422 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 TUBGCP2Q9BSJ2 902 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 SRP68Q9UHB9 627 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 RTCBQ9Y3I0 505 aaKnown RBP13.56□□□□□ -0.24
CPSF7-218ENST00000537641 JRKLQ9Y4A0 524 aa13.56□□□□□ -0.24
CPSF7-218ENST00000537641 TNRC6CQ9HCJ0 1690 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 A0A087WUV0 522 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 GOLGA6BA6NDN3 693 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 AGPSO00116 658 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 PES1O00541 588 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 TACC1O75410 805 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 CLSTN1O94985 981 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 TRIM21P19474 475 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 TNFRSF8P28908 595 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 HNRNPH3P31942 346 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 GGCXP38435 758 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 DUSP9Q99956 384 aaKnown RBP13.55□□□□□ -0.24
CPSF7-218ENST00000537641 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
CPSF7-218ENST00000537641 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 CYP2D7A0A087X1C5 515 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 RASSF10A6NK89 507 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 A6NNZ2 444 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 UBAP1LF5GYI3 381 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 SMIM22K7EJ46 135 aa13.54□□□□□ -0.24
CPSF7-218ENST00000537641 M0R2N6 131 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms