RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 TRPM8Q7Z2W7 1104 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 CREG2Q8IUH2 290 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 SAMD15Q9P1V8 674 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 KCNH3Q9ULD8 1083 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 DLG5Q8TDM6 1919 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 ANKARQ7Z5J8 1434 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 TULP4Q9NRJ4 1543 aa9.41□□□□□ -0.9
SRGAP1-202ENST00000537556 MBD4O95243 580 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 ZFXP17010 805 aaPredicted RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 TCP1P17987 556 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 WASHC4Q2M389 1173 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 RESP18Q5W5W9 173 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 HAUS3Q68CZ6 603 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 DHX32Q7L7V1 743 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 APTXQ7Z2E3 356 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 SPICE1Q8N0Z3 855 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNF274Q96GC6 653 aaPredicted RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 MTRQ99707 1265 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 DLGAP2Q9P1A6 1054 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 JCADQ9P266 1359 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 MED23Q9ULK4 1368 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 EIF4E1BA6NMX2 242 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PHF20L1A8MW92 1017 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PDHA1P08559 390 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 CYP11B2P19099 503 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 MATR3P43243 847 aaKnown RBP eCLIP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 CCDC15Q0P6D6 951 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 KIF5AQ12840 1032 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PRPF4BQ13523 1007 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 MORC3Q14149 939 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 POSTNQ15063 836 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 SHC4Q6S5L8 630 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 CENPTQ96BT3 561 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 KLHL29Q96CT2 875 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 FSD1Q9BTV5 496 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PLCB1Q9NQ66 1216 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 ZNHIT6Q9NWK9 470 aaKnown RBP9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 TMOD4Q9NZQ9 345 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 ITGB1BP2Q9UKP3 347 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 PLAAQ9Y263 795 aa9.4□□□□□ -0.9
SRGAP1-202ENST00000537556 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.91
SRGAP1-202ENST00000537556 AGLP35573 1532 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 A0A0D9SFI3 127 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TMEM221A6NGB7 291 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TAF5LO75529 589 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 ACADSP16219 412 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TMOD1P28289 359 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 MSH2P43246 934 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 INHBCP55103 352 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 KBTBD12Q3ZCT8 623 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 AGBL2Q5U5Z8 902 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RNF220Q5VTB9 566 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 IRGCQ6NXR0 463 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 SMC1BQ8NDV3 1235 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RPS6KC1Q96S38 1066 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 GDF3Q9NR23 364 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 ZRANB1Q9UGI0 708 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 NFU1Q9UMS0 254 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 MAPK8IP1Q9UQF2 711 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 REXO2Q9Y3B8 237 aaKnown RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 SLC4A7Q9Y6M7 1214 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 IFT172Q9UG01 1749 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 AFF2P51816 1311 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 LRRC10BA6NIK2 292 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 IQCDQ96DY2 449 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 PCDH18Q9HCL0 1135 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 KIF1BO60333 1816 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 F8W031 263 aaPredicted RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 VCAM1P19320 739 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RFC5P40937 340 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TUBP50607 506 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 PSMD7P51665 324 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 KCNJ2P63252 427 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TMEM62Q0P6H9 643 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TMEM132EQ6IEE7 984 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 ZBTB8BQ8NAP8 495 aaPredicted RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 IFT81Q8WYA0 676 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 MPHOSPH6Q99547 160 aaKnown RBP9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 RAB17Q9H0T7 212 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 ADAM22Q9P0K1 906 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TET3O43151 1660 aa9.39□□□□□ -0.91
SRGAP1-202ENST00000537556 TACC1O75410 805 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 GSTT1P30711 240 aa9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 CARSP49589 748 aaKnown RBP9.38□□□□□ -0.91
SRGAP1-202ENST00000537556 SESN3P58005 492 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 805 ms