RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 NCOA1Q15788 1441 aa8.45□□□□□ -1.06
CLIP1-207ENST00000536634 SSU72P8A0A1W2PR75 194 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-207ENST00000536634 H0Y8X5 98 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 RANGAP1P46060 587 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-207ENST00000536634 KCNMB1Q16558 191 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 TIGD5Q53EQ6 642 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 SLC43A3Q8NBI5 491 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 LINC01599Q8WXQ3 324 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 FMNL2Q96PY5 1086 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 C19orf44Q9H6X5 657 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 KDM5CP41229 1560 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 DIP2CQ9Y2E4 1556 aa8.44□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF503-AS2A6NEH8 195 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF205O95201 554 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 EPHX1P07099 455 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 BMP8BP34820 402 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 NOL9Q5SY16 702 aaKnown RBP8.43□□□□□ -1.06
CLIP1-207ENST00000536634 VHLLQ6RSH7 139 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 FIBCD1Q8N539 461 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 PDZD8Q8NEN9 1154 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 KRTAP4-9Q9BYQ8 210 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF408Q9H9D4 720 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 SUSD2Q9UGT4 822 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 FHOD1Q9Y613 1164 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
CLIP1-207ENST00000536634 RAC2P15153 192 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 VAV1P15498 845 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 KIAA1211LQ6NV74 962 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 ABHD4Q8TB40 342 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 MYLIPQ8WY64 445 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 DHX38Q92620 1227 aaKnown RBP8.42□□□□□ -1.06
CLIP1-207ENST00000536634 FGD4Q96M96 766 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 GMLQ99445 158 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 NOL6Q9H6R4 1146 aaKnown RBP8.42□□□□□ -1.06
CLIP1-207ENST00000536634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLIP1-207ENST00000536634 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 ABCA6Q8N139 1617 aa8.42□□□□□ -1.06
CLIP1-207ENST00000536634 ARID1BQ8NFD5 2236 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 KIF14Q15058 1648 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 CAMSAP1Q5T5Y3 1602 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 MED1Q15648 1581 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 REREQ9P2R6 1566 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF335Q9H4Z2 1342 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 USP2O75604 605 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 EFEMP2O95967 443 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 GSNP06396 782 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 ITGA4P13612 1032 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 DUSP4Q13115 394 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 TCEAL1Q15170 157 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 RTP2Q5QGT7 225 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 HEATR6Q6AI08 1181 aaKnown RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 ADCY4Q8NFM4 1077 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 LIN37Q96GY3 246 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-207ENST00000536634 MAP6Q96JE9 813 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 SLC12A9Q9BXP2 914 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 ACTR10Q9NZ32 417 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 PRKAG3Q9UGI9 489 aa8.41□□□□□ -1.06
CLIP1-207ENST00000536634 ZNF518AQ6AHZ1 1483 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 TRAPPC8Q9Y2L5 1435 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 NOTOA8MTQ0 251 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 B2RBV5 119 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 GLI1P08151 1106 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 ZC3H6P61129 1189 aaKnown RBP8.4□□□□□ -1.06
CLIP1-207ENST00000536634 NAALADL2Q58DX5 795 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 TMEM67Q5HYA8 995 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 LARP1BQ659C4 914 aaKnown RBP8.4□□□□□ -1.06
CLIP1-207ENST00000536634 AFAP1Q8N556 730 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 HHIPL1Q96JK4 782 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 ZDHHC15Q96MV8 337 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 RNF32Q9H0A6 362 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 WHRNQ9P202 907 aa8.4□□□□□ -1.06
CLIP1-207ENST00000536634 SRCAPQ6ZRS2 3230 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 FITM1A5D6W6 292 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 PPP2R5DQ14738 602 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 TNNI3KQ59H18 835 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 C6orf15Q6UXA7 325 aaPredicted RBP8.39□□□□□ -1.07
CLIP1-207ENST00000536634 OXR1Q8N573 874 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 ANKS4BQ8N8V4 417 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 CDADC1Q9BWV3 514 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 ERVK13-1Q9NX77 482 aa8.39□□□□□ -1.07
CLIP1-207ENST00000536634 A0A087WZG4 1122 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 GALK1P51570 392 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 NR0B2Q15466 257 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 CWF19L1Q69YN2 538 aaKnown RBP8.38□□□□□ -1.07
CLIP1-207ENST00000536634 OGFOD2Q6N063 350 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 ADAT2Q7Z6V5 191 aaKnown RBP8.38□□□□□ -1.07
CLIP1-207ENST00000536634 ZNF513Q8N8E2 541 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-207ENST00000536634 MICAL1Q8TDZ2 1067 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 FCRL2Q96LA5 508 aaPredicted RBP8.38□□□□□ -1.07
CLIP1-207ENST00000536634 GBP3Q9H0R5 595 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 APEX2Q9UBZ4 518 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 AGLP35573 1532 aa8.38□□□□□ -1.07
CLIP1-207ENST00000536634 PSPNO60542 156 aa8.37□□□□□ -1.07
CLIP1-207ENST00000536634 GSTM1P09488 218 aa8.37□□□□□ -1.07
CLIP1-207ENST00000536634 CHRNEQ04844 493 aa8.37□□□□□ -1.07
CLIP1-207ENST00000536634 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms