RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 HAND2P61296 217 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 CNTN2Q02246 1040 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 CCDC178Q5BJE1 867 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 SYDE2Q5VT97 1194 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 BTNL9Q6UXG8 535 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
RTN3-207ENST00000536011 ANKRD33Q7Z3H0 272 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 PLEKHM2Q8IWE5 1019 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 BADQ92934 168 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 TMEM47Q9BQJ4 181 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 RANBP17Q9H2T7 1088 aaKnown RBP15.44■□□□□ 0.06
RTN3-207ENST00000536011 CYP39A1Q9NYL5 469 aa15.44■□□□□ 0.06
RTN3-207ENST00000536011 ADD3Q9UEY8 706 aaKnown RBP15.44■□□□□ 0.06
RTN3-207ENST00000536011 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 KIAA0355O15063 1070 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 TNFAIP2Q03169 654 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
RTN3-207ENST00000536011 GNASQ5JWF2 1037 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
RTN3-207ENST00000536011 NSMFQ6X4W1 530 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 IQCA1Q86XH1 822 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 MPHOSPH6Q99547 160 aaKnown RBP15.43■□□□□ 0.06
RTN3-207ENST00000536011 TMEM39AQ9NV64 488 aa15.43■□□□□ 0.06
RTN3-207ENST00000536011 MCM3APO60318 1980 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
RTN3-207ENST00000536011 TRIM43BA6NCK2 446 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 ASGR1P07306 291 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 PDHBP11177 359 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
RTN3-207ENST00000536011 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
RTN3-207ENST00000536011 CWC27Q6UX04 472 aaKnown RBP15.42■□□□□ 0.06
RTN3-207ENST00000536011 SH3RF1Q7Z6J0 888 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 TRIM43Q96BQ3 446 aaPredicted RBP15.42■□□□□ 0.06
RTN3-207ENST00000536011 KATNBL1Q9H079 304 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 AP5M1Q9H0R1 490 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 STXBP5LQ9Y2K9 1186 aa15.42■□□□□ 0.06
RTN3-207ENST00000536011 LAMA4Q16363 1823 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 TLR3O15455 904 aaKnown RBP15.41■□□□□ 0.06
RTN3-207ENST00000536011 ZEB2O60315 1214 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 CABYRO75952 493 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 IGHDP01880 384 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 SLC16A2P36021 539 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 SNAP25P60880 206 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 NKX3-2P78367 333 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 FPGSQ05932 587 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 ZNF543Q08ER8 600 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 MUM1L1Q5H9M0 696 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 Q7L0L9 218 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 TLK2Q86UE8 772 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 TBC1D10CQ8IV04 446 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 SEZ6LQ9BYH1 1024 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 GPCPD1Q9NPB8 672 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 MTMR10Q9NXD2 777 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 CTNNA3Q9UI47 895 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 FRMPD2Q68DX3 1309 aaPredicted RBP15.41■□□□□ 0.06
RTN3-207ENST00000536011 WDR19Q8NEZ3 1342 aa15.41■□□□□ 0.06
RTN3-207ENST00000536011 MYADML2A6NDP7 307 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 ADCY6O43306 1168 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 SHHQ15465 462 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
RTN3-207ENST00000536011 ZNF697Q5TEC3 545 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 IQSEC1Q6DN90 963 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 DGKHQ86XP1 1220 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 DSCC1Q9BVC3 393 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 Q9Y3F1 56 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 NEDD4P46934 1319 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
RTN3-207ENST00000536011 PTPDC1A2A3K4 754 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 B4DLN1 442 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 ARVCFO00192 962 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 SNHG28P0DPA3 235 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 MRPL12P52815 198 aaKnown RBP15.39■□□□□ 0.05
RTN3-207ENST00000536011 SMAD3P84022 425 aaKnown RBP15.39■□□□□ 0.05
RTN3-207ENST00000536011 FSCN1Q16658 493 aaKnown RBP15.39■□□□□ 0.05
RTN3-207ENST00000536011 TTBK2Q6IQ55 1244 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 SLC17A8Q8NDX2 589 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 RNPC3Q96LT9 517 aaKnown RBP15.39■□□□□ 0.05
RTN3-207ENST00000536011 CNNM2Q9H8M5 875 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 A0A0C4DFX4 3053 aa15.39■□□□□ 0.05
RTN3-207ENST00000536011 TIMP1P01033 207 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 BAATQ14032 418 aaPredicted RBP15.38■□□□□ 0.05
RTN3-207ENST00000536011 C9orf50Q5SZB4 431 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 FBXO16Q8IX29 292 aaPredicted RBP15.38■□□□□ 0.05
RTN3-207ENST00000536011 PNMA1Q8ND90 353 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 MORC4Q8TE76 937 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 KRT23Q9C075 422 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 MAF1Q9H063 256 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 KAT14Q9H8E8 782 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
RTN3-207ENST00000536011 ASTN1O14525 1302 aa15.38■□□□□ 0.05
RTN3-207ENST00000536011 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.37■□□□□ 0.05
RTN3-207ENST00000536011 NFIBO00712 420 aa15.37■□□□□ 0.05
RTN3-207ENST00000536011 KDM4AO75164 1064 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms