RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 MCCP23508 829 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FSCN1Q16658 493 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 NSMFQ6X4W1 530 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 KCTD1Q719H9 257 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CCPG1Q9ULG6 757 aa15.36■□□□□ 0.05
TNFRSF1A-207ENST00000535958 GRXCR1A8MXD5 290 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FGBP02675 491 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 CYP2C18P33260 490 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PBX2P40425 430 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ITGA7Q13683 1181 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 EEPD1Q7L9B9 569 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 SEC62Q99442 399 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 KATNBL1Q9H079 304 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 TOMM22Q9NS69 142 aa15.35■□□□□ 0.05
TNFRSF1A-207ENST00000535958 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 SOWAHBA6NEL2 793 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 DYNC1LI2O43237 492 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 RANBP6O60518 1105 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 IGFBP4P22692 258 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 RCSD1Q6JBY9 416 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 MPHOSPH6Q99547 160 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 SLC28A3Q9HAS3 691 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 VTA1Q9NP79 307 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 PRDM6Q9NQX0 595 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 THEGQ9P2T0 379 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ZNF536O15090 1300 aa15.34■□□□□ 0.05
TNFRSF1A-207ENST00000535958 ZBBXA8MT70 800 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PLA2G6O60733 806 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CD4P01730 458 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SMPD1P17405 629 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CCL23P55773 120 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 NKX3-2P78367 333 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 ZMYM1Q5SVZ6 1142 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 RASIP1Q5U651 963 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 IQSEC1Q6DN90 963 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 C16orf59Q7L2K0 433 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 OTOP2Q7RTS6 562 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 RPUSD2Q8IZ73 545 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 HERVK_113Q902F9 699 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 TSPYL2Q9H2G4 693 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 GNEQ9Y223 722 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1A-207ENST00000535958 TNFRSF10AO00220 468 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CTAGE5O15320 804 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 ICAM1P05362 532 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 MX1P20591 662 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SNAP25P60880 206 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CTDSPL2Q05D32 466 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 AKNAD1Q5T1N1 836 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 DCAF4Q8WV16 495 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 NKX2-4Q9H2Z4 354 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 GPHNQ9NQX3 736 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 POLR3EQ9NVU0 708 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 Q9Y3F1 56 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 ASTN1O14525 1302 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 RAD50Q92878 1312 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SPTBN5Q9NRC6 3674 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PRUNE2Q8WUY3 3088 aa15.32■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PTPDC1A2A3K4 754 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SUPT20HL2P0C7V6 817 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CPT1AP50416 773 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 MUM1L1Q5H9M0 696 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PPP2R2DQ66LE6 453 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SLC43A3Q8NBI5 491 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PI4K2BQ8TCG2 481 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 ATXN2LQ8WWM7 1075 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SLC4A7Q9Y6M7 1214 aa15.31■□□□□ 0.04
TNFRSF1A-207ENST00000535958 B4GALT4O60513 344 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 NMT2O60551 498 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PSMC6P62333 389 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CCDC85BQ15834 202 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 FAM47CQ5HY64 1035 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 RRP12Q5JTH9 1297 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 NOC4LQ9BVI4 516 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 TRPV6Q9H1D0 765 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PDGFCQ9NRA1 345 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 CXXC1Q9P0U4 656 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PNMA2Q9UL42 364 aa15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
TNFRSF1A-207ENST00000535958 PFKMP08237 780 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 MYL3P08590 195 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 ACTN1P12814 892 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 DUSP28Q4G0W2 176 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 SYDE2Q5VT97 1194 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 TAPT1Q6NXT6 567 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 MICALL1Q8N3F8 863 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 OR6J1Q8NGC5 347 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 WDR11Q9BZH6 1224 aa15.29■□□□□ 0.04
TNFRSF1A-207ENST00000535958 RANBP17Q9H2T7 1088 aaKnown RBP15.29■□□□□ 0.04
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