RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 CALM2P0DP24 149 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 CALM3P0DP25 149 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 CAPN2P17655 700 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 FGD1P98174 961 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 BLOC1S2Q6QNY1 142 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 MAP3K14Q99558 947 aa25.83■■□□□ 1.73
VPS37C-202ENST00000535818 PTPDC1A2A3K4 754 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 EXOSC10Q01780 885 aaKnown RBP25.82■■□□□ 1.72
VPS37C-202ENST00000535818 ZNF467Q7Z7K2 595 aaPredicted RBP25.82■■□□□ 1.72
VPS37C-202ENST00000535818 FBXO11Q86XK2 927 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 HOMER1Q86YM7 354 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 MSL3Q8N5Y2 521 aaKnown RBP25.82■■□□□ 1.72
VPS37C-202ENST00000535818 USP26Q9BXU7 913 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 CYP39A1Q9NYL5 469 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 CNPY2Q9Y2B0 182 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 MYH6P13533 1939 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 ABCB11O95342 1321 aa25.82■■□□□ 1.72
VPS37C-202ENST00000535818 RXRAP19793 462 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 PSMA5P28066 241 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 CNTN2Q02246 1040 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 PRAMEF19Q5SWL8 479 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 SGMS1Q86VZ5 419 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 RAB11FIP4Q86YS3 637 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 FAM133AQ8N9E0 248 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 TRPV1Q8NER1 839 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 CRISPLD2Q9H0B8 497 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 SMCHD1A6NHR9 2005 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 SYNGAP1Q96PV0 1343 aa25.81■■□□□ 1.72
VPS37C-202ENST00000535818 MSCO60682 206 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 CPA1P15085 419 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 MICU3Q86XE3 530 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 CCDC144CPQ8IYA2 1237 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 CLEC4DQ8WXI8 215 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 AMNQ9BXJ7 453 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 DDX20Q9UHI6 824 aaKnown RBP25.8■■□□□ 1.72
VPS37C-202ENST00000535818 NRBP1Q9UHY1 535 aa25.8■■□□□ 1.72
VPS37C-202ENST00000535818 ZBTB5O15062 677 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 FARP2O94887 1054 aaPredicted RBP25.79■■□□□ 1.72
VPS37C-202ENST00000535818 CASTP20810 708 aaKnown RBP25.79■■□□□ 1.72
VPS37C-202ENST00000535818 GNAQP50148 359 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 BAATQ14032 418 aaPredicted RBP25.79■■□□□ 1.72
VPS37C-202ENST00000535818 MAMDC4Q6UXC1 1216 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 RNF207Q6ZRF8 634 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 PIGSQ96S52 555 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 RIOX1Q9H6W3 641 aa25.79■■□□□ 1.72
VPS37C-202ENST00000535818 SEPT4O43236 478 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 CALML3P27482 149 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 APOA5Q6Q788 366 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 MTMR8Q96EF0 704 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 FGD4Q96M96 766 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 LZTS2Q9BRK4 669 aa25.78■■□□□ 1.72
VPS37C-202ENST00000535818 NAP1L2Q9ULW6 460 aaPredicted RBP25.78■■□□□ 1.72
VPS37C-202ENST00000535818 MRPL11Q9Y3B7 192 aaKnown RBP25.78■■□□□ 1.72
VPS37C-202ENST00000535818 SOWAHBA6NEL2 793 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 ASB14A6NK59 587 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 CYTH3O43739 400 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 RPS6KB1P23443 525 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 SLC35G1Q2M3R5 365 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 SLC30A10Q6XR72 485 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 Q6ZUG5 572 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 ARMCX2Q7L311 632 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 PIBF1Q8WXW3 757 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.77■■□□□ 1.72
VPS37C-202ENST00000535818 ADD3Q9UEY8 706 aaKnown RBP25.77■■□□□ 1.72
VPS37C-202ENST00000535818 ZHX1Q9UKY1 873 aaPredicted RBP25.77■■□□□ 1.72
VPS37C-202ENST00000535818 OGDHLQ9ULD0 1010 aa25.77■■□□□ 1.72
VPS37C-202ENST00000535818 KLF18A0A0U1RQI7 1052 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 RPS6P62753 249 aaKnown RBP25.76■■□□□ 1.71
VPS37C-202ENST00000535818 TRAF1Q13077 416 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 LHX8Q68G74 356 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 MCF2L2Q86YR7 1114 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 ANKLE1Q8NAG6 615 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 SPZ1Q9BXG8 430 aa25.76■■□□□ 1.71
VPS37C-202ENST00000535818 FRMPD3Q5JV73 1810 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 ZBTB43O43298 467 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 PLEKHA8P1O95397 391 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 SNAI1O95863 264 aaPredicted RBP25.75■■□□□ 1.71
VPS37C-202ENST00000535818 ANO1Q5XXA6 986 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 FANCBQ8NB91 859 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 RRP36Q96EU6 259 aaKnown RBP25.75■■□□□ 1.71
VPS37C-202ENST00000535818 PCDHA1Q9Y5I3 950 aa25.75■■□□□ 1.71
VPS37C-202ENST00000535818 PNMA6FA0A0J9YX94 578 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 PPP1R11O60927 126 aaPredicted RBP25.74■■□□□ 1.71
VPS37C-202ENST00000535818 ZNF865P0CJ78 1059 aaPredicted RBP25.74■■□□□ 1.71
VPS37C-202ENST00000535818 AKR1A1P14550 325 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 RGS22Q8NE09 1264 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 BRF1Q92994 677 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 PURBQ96QR8 312 aaKnown RBP25.74■■□□□ 1.71
VPS37C-202ENST00000535818 ABHD16BQ9H3Z7 469 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 RBM28Q9NW13 759 aaKnown RBP25.74■■□□□ 1.71
VPS37C-202ENST00000535818 SEC63Q9UGP8 760 aaKnown RBP25.74■■□□□ 1.71
VPS37C-202ENST00000535818 BRPF3Q9ULD4 1205 aa25.74■■□□□ 1.71
VPS37C-202ENST00000535818 BRCA2P51587 3418 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 LCTP09848 1927 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 GOLGA8AA7E2F4 631 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 GOLGA8BA8MQT2 603 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 SMARCA1P28370 1054 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 ALDH5A1P51649 535 aaPredicted RBP25.73■■□□□ 1.71
VPS37C-202ENST00000535818 ACVR2BQ13705 512 aa25.73■■□□□ 1.71
VPS37C-202ENST00000535818 RTN1Q16799 776 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms