RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TRAF5O00463 557 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 KRT14P02533 472 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 BTG4Q9NY30 223 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 EXOC5O00471 708 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 KCNQ4P56696 695 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 TCERG1LQ5VWI1 586 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 CCNI2Q6ZMN8 369 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-232ENST00000535094 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 TRIM31Q9BZY9 425 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 TMEM60Q9H2L4 133 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 SMIM23A6NLE4 172 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 IRAK1P51617 712 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 STAG2Q8N3U4 1231 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 SEPT11Q9NVA2 429 aaKnown RBP17.67■□□□□ 0.42
MCF2L-232ENST00000535094 SEC63Q9UGP8 760 aaKnown RBP17.67■□□□□ 0.42
MCF2L-232ENST00000535094 FAM184BQ9ULE4 1060 aa17.67■□□□□ 0.42
MCF2L-232ENST00000535094 ADAMTS2O95450 1211 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 USP8P40818 1118 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 AMPD3Q01432 767 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 EHHADHQ08426 723 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 A0A087WUV0 522 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-232ENST00000535094 BACH1O14867 736 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 SYF2O95926 243 aaKnown RBP17.66■□□□□ 0.42
MCF2L-232ENST00000535094 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 EEF1GP26641 437 aaKnown RBP17.66■□□□□ 0.42
MCF2L-232ENST00000535094 ZBED6P86452 979 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 ANKRD40Q6AI12 368 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 P2RX5Q93086 422 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 KRT12Q99456 494 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 BIN2Q9UBW5 565 aaPredicted RBP17.66■□□□□ 0.42
MCF2L-232ENST00000535094 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 GOLGA6L7A0A1B0GV03 622 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 EIF6P56537 245 aaKnown RBP17.66■□□□□ 0.42
MCF2L-232ENST00000535094 RPGRIP1Q96KN7 1286 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 OVOS2A0A0G2JMS6 1433 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 NFAT5O94916 1531 aa17.66■□□□□ 0.42
MCF2L-232ENST00000535094 USP17L3A6NCW0 530 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 USP17L4A6NCW7 530 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 E7EVH7 732 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 LONP1P36776 959 aaKnown RBP17.65■□□□□ 0.42
MCF2L-232ENST00000535094 KIF11P52732 1056 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 CORO7P57737 925 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 STK4Q13043 487 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 TRIM28Q13263 835 aaKnown RBP17.65■□□□□ 0.42
MCF2L-232ENST00000535094 USP17L1Q7RTZ2 530 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 MTRQ99707 1265 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 NUP58Q9BVL2 599 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 CCDC113Q9H0I3 377 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 PCDHA13Q9Y5I0 950 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 CAPN6Q9Y6Q1 641 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 WDR17Q8IZU2 1322 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 NNTQ13423 1086 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 CEP85LQ5SZL2 805 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
MCF2L-232ENST00000535094 GFPT1Q06210 699 aaPredicted RBP17.65■□□□□ 0.42
MCF2L-232ENST00000535094 ADSSL1Q8N142 457 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 SPATA4Q8NEY3 305 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 ARL8AQ96BM9 186 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 CAPN11Q9UMQ6 739 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 HYOU1Q9Y4L1 999 aa17.65■□□□□ 0.42
MCF2L-232ENST00000535094 TMEM94Q12767 1356 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 ADAMTS3O15072 1205 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 HEXIM1O94992 359 aaKnown RBP17.64■□□□□ 0.42
MCF2L-232ENST00000535094 PBX1P40424 430 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 NOX5Q96PH1 765 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 TSG101Q99816 390 aa17.64■□□□□ 0.42
MCF2L-232ENST00000535094 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 TNNI2P48788 182 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 GUCY1A3Q02108 690 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 TROAPQ12815 778 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
MCF2L-232ENST00000535094 CCDC155Q8N6L0 562 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 TSGA10Q9BZW7 698 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 PSMD14O00487 310 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
MCF2L-232ENST00000535094 IFFO1Q0D2I5 559 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 IFT88Q13099 833 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 TAX1BP1Q86VP1 789 aa17.64■□□□□ 0.41
MCF2L-232ENST00000535094 ZSCAN5CA6NGD5 496 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-232ENST00000535094 WDR93Q6P2C0 686 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 SV2BQ7L1I2 683 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 UBLCP1Q8WVY7 318 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-232ENST00000535094 TXNRD1Q16881 649 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 PDXDC2PQ6P474 469 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 SPAG5Q96R06 1193 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 ANKIB1Q9P2G1 1089 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 TLDC2A0PJX2 215 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 CFAP221Q4G0U5 840 aa17.63■□□□□ 0.41
MCF2L-232ENST00000535094 CT47A1Q5JQC4 288 aaPredicted RBP17.63■□□□□ 0.41
MCF2L-232ENST00000535094 SCLT1Q96NL6 688 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms