RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 RASGRP4Q8TDF6 673 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 MICAL1Q8TDZ2 1067 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 ARPP21Q9UBL0 812 aaPredicted RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 CPLX1O14810 134 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 FOXN1O15353 648 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 ALDH1B1P30837 517 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 SHMT1P34896 483 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 IARSP41252 1262 aaKnown RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 SF3A3Q12874 501 aaKnown RBP eCLIP10.14□□□□□ -0.793e-6■□□□□ 10.2
SF3B2-216ENST00000534765 R3HDM1Q15032 1099 aaKnown RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 STYK1Q6J9G0 422 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 RUFY1Q96T51 708 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 UBAC1Q9BSL1 405 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 TSPY2A6NKD2 308 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 EDIL3O43854 480 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 CRKP46108 304 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 GSDMDP57764 484 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 ETF1P62495 437 aaKnown RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 USP17L2Q6R6M4 530 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 C16orf86Q6ZW13 317 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 TNFRSF25Q93038 417 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 SGIP1Q9BQI5 828 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 ELP1O95163 1332 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 HTTP42858 3142 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 PPP1R12BO60237 982 aaPredicted RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 LMOD1P29536 600 aaPredicted RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 SHC4Q6S5L8 630 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 BCAS4Q8TDM0 211 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 TDRD3Q9H7E2 651 aaKnown RBP10.14□□□□□ -0.79
SF3B2-216ENST00000534765 USP40Q9NVE5 1235 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 FAM169AQ9Y6X4 670 aa10.14□□□□□ -0.79
SF3B2-216ENST00000534765 A0A087X0B3 334 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 MYO1FO00160 1098 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 MMP1P03956 469 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 PDCP20941 246 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 CEP85LQ5SZL2 805 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 TMTC3Q6ZXV5 915 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
SF3B2-216ENST00000534765 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 THOC1Q96FV9 657 aaKnown RBP10.13□□□□□ -0.79
SF3B2-216ENST00000534765 RBBP5Q15291 538 aaKnown RBP10.13□□□□□ -0.79
SF3B2-216ENST00000534765 IL17AQ16552 155 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 FLAD1Q8NFF5 587 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 CABS1Q96KC9 395 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 CCP110O43303 1012 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 CLSTN1O94985 981 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 DLK2Q6UY11 383 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 KIF9Q9HAQ2 790 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 LZTFL1Q9NQ48 299 aa10.13□□□□□ -0.79
SF3B2-216ENST00000534765 DDX19AQ9NUU7 478 aaKnown RBP10.13□□□□□ -0.79
SF3B2-216ENST00000534765 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 KIAA1755Q5JYT7 1200 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 SPTY2D1Q68D10 685 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 DIS3L2Q8IYB7 885 aaKnown RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 LRRC47Q8N1G4 583 aaKnown RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 FRMPD2Q68DX3 1309 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PSMD14O00487 310 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PPP1R11O60927 126 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PPFIA4O75335 1185 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 FAM160A1Q05DH4 1040 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PNMA1Q8ND90 353 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 LRRC15Q8TF66 581 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 UBA5Q9GZZ9 404 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 POLD4Q9HCU8 107 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 NDUFAB1O14561 156 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PTGER2P43116 358 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 ME1P48163 572 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 SSRP1Q08945 709 aaKnown RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 FOXP4Q8IVH2 680 aaPredicted RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 CCAR1Q8IX12 1150 aaKnown RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
SF3B2-216ENST00000534765 EYA3Q99504 573 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 PHF20Q9BVI0 1012 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 RTEL1Q9NZ71 1219 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 STX8Q9UNK0 236 aa10.12□□□□□ -0.79
SF3B2-216ENST00000534765 NFKBIEO00221 500 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 MYBL1P10243 752 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 DGKZQ13574 1117 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 MAP9Q49MG5 647 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 C11orf57Q6ZUT1 292 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CCDC84Q86UT8 332 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 FMR1NBQ8N0W7 255 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 TBC1D31Q96DN5 1066 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CCDC114Q96M63 670 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 RNF41Q9H4P4 317 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 IGKV6D-41A0A0C4DH26 115 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CLRN2A0PK11 232 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 LRRC31Q6UY01 552 aa10.11□□□□□ -0.79
SF3B2-216ENST00000534765 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 RPUSD2Q8IZ73 545 aaKnown RBP10.11□□□□□ -0.79
SF3B2-216ENST00000534765 CASP1P29466 404 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms