RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 CXCL17Q6UXB2 119 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 TLK2Q86UE8 772 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
CCDC84-208ENST00000534656 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
CCDC84-208ENST00000534656 PBX4Q9BYU1 374 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 IL17RBQ9NRM6 502 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 PRR12Q9ULL5 1215 aa16.46■□□□□ 0.23
CCDC84-208ENST00000534656 MCM3APO60318 1980 aa16.46■□□□□ 0.22
CCDC84-208ENST00000534656 PRUNE2Q8WUY3 3088 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 GRXCR1A8MXD5 290 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 FOXP2O15409 715 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 SMPD1P17405 629 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 CYP2C18P33260 490 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 PBX2P40425 430 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 SNAP25P60880 206 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 CTDSPL2Q05D32 466 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 FSCN1Q16658 493 aaKnown RBP16.45■□□□□ 0.22
CCDC84-208ENST00000534656 MUM1L1Q5H9M0 696 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 IQSEC1Q6DN90 963 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 AP5M1Q9H0R1 490 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 IL23AQ9NPF7 189 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 INCENPQ9NQS7 918 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 CYP39A1Q9NYL5 469 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 PCDHB15Q9Y5E8 787 aa16.45■□□□□ 0.22
CCDC84-208ENST00000534656 SPTBN5Q9NRC6 3674 aaKnown RBP16.44■□□□□ 0.22
CCDC84-208ENST00000534656 VCANP13611 3396 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 DYNC1LI2O43237 492 aaPredicted RBP16.44■□□□□ 0.22
CCDC84-208ENST00000534656 ZEB2O60315 1214 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 NMT2O60551 498 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 MX1P20591 662 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 ITGA7Q13683 1181 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 TAPT1Q6NXT6 567 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 USP38Q8NB14 1042 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 HERVK_113Q902F9 699 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 SEZ6LQ9BYH1 1024 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 HIPK3Q9H422 1215 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 ANAPC4Q9UJX5 808 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 Q9Y3F1 56 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
CCDC84-208ENST00000534656 GRIN2DO15399 1336 aa16.44■□□□□ 0.22
CCDC84-208ENST00000534656 FGBP02675 491 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 NOVP48745 357 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 NSMFQ6X4W1 530 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 RASGRP2Q7LDG7 609 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 MORC4Q8TE76 937 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 GAS2L1Q99501 681 aaPredicted RBP16.43■□□□□ 0.22
CCDC84-208ENST00000534656 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
CCDC84-208ENST00000534656 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
CCDC84-208ENST00000534656 ICAM1P05362 532 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 PTGS1P23219 599 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 EEPD1Q7L9B9 569 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 FBXO16Q8IX29 292 aaPredicted RBP16.42■□□□□ 0.22
CCDC84-208ENST00000534656 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 MTIF3Q9H2K0 278 aaKnown RBP16.42■□□□□ 0.22
CCDC84-208ENST00000534656 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 MSRAQ9UJ68 235 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 MTMR7Q9Y216 660 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 UMODL1Q5DID0 1318 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 SALL3Q9BXA9 1300 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 LRRC37A2A6NM11 1700 aa16.42■□□□□ 0.22
CCDC84-208ENST00000534656 ORC4O43929 436 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 B4GALT4O60513 344 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 FGRP09769 529 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 ALX1Q15699 326 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 RAB30Q15771 203 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 CCDC96Q2M329 555 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 VPS53Q5VIR6 699 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 BTNL9Q6UXG8 535 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 PURBQ96QR8 312 aaKnown RBP16.41■□□□□ 0.22
CCDC84-208ENST00000534656 NOC4LQ9BVI4 516 aaKnown RBP16.41■□□□□ 0.22
CCDC84-208ENST00000534656 TRPV6Q9H1D0 765 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 RANBP17Q9H2T7 1088 aaKnown RBP16.41■□□□□ 0.22
CCDC84-208ENST00000534656 PRDM12Q9H4Q4 367 aa16.41■□□□□ 0.22
CCDC84-208ENST00000534656 CXXC1Q9P0U4 656 aaPredicted RBP16.41■□□□□ 0.22
CCDC84-208ENST00000534656 CCL23P55773 120 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 PSMC6P62333 389 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 BAATQ14032 418 aaPredicted RBP16.4■□□□□ 0.22
CCDC84-208ENST00000534656 DUSP28Q4G0W2 176 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 AKNAD1Q5T1N1 836 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 TTBK2Q6IQ55 1244 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
CCDC84-208ENST00000534656 ADD3Q9UEY8 706 aaKnown RBP16.4■□□□□ 0.22
CCDC84-208ENST00000534656 LOC102724159A0A0B4J2E5 919 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 SLC16A2P36021 539 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 ALDH5A1P51649 535 aaPredicted RBP16.39■□□□□ 0.21
CCDC84-208ENST00000534656 PWP2Q15269 919 aaKnown RBP16.39■□□□□ 0.21
CCDC84-208ENST00000534656 OTOP2Q7RTS6 562 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 PPM1EQ8WY54 764 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 WNT8AQ9H1J5 351 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
CCDC84-208ENST00000534656 NFIBO00712 420 aa16.38■□□□□ 0.21
CCDC84-208ENST00000534656 TOP1P11387 765 aaKnown RBP16.38■□□□□ 0.21
CCDC84-208ENST00000534656 ADGRE1Q14246 886 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms