RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 MRGPRX3Q96LB0 322 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 ACSL6Q9UKU0 697 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
ATPAF1-211ENST00000534216 TBC1D8O95759 1140 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 PNLIPP16233 465 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 ATP2B1P20020 1258 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 SEPHS1P49903 392 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 RAB33AQ14088 237 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 EEPD1Q7L9B9 569 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 JAMLQ86YT9 394 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 FAM84AQ96KN4 292 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 EPB41L4BQ9H329 900 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 KCNK12Q9HB15 430 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 DCP1AQ9NPI6 582 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 IMPACTQ9P2X3 320 aa6.28□□□□□ -1.4
ATPAF1-211ENST00000534216 ITGAVP06756 1048 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 PRKCAP17252 672 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 PDE6BP35913 854 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 ADGRF1Q5T601 910 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 GTF2IRD2BQ6EKJ0 949 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 GTF2IRD2Q86UP8 949 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 ZNF227Q86WZ6 799 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 FBXO15Q8NCQ5 510 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 NUP43Q8NFH3 380 aa6.27□□□□□ -1.41
ATPAF1-211ENST00000534216 OR14I1A6ND48 311 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 TBX1O43435 398 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 C8AP07357 584 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 ERVFRD-1P60508 538 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 CYP4F8P98187 520 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 MVKQ03426 396 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 SCRN1Q12765 414 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 LAPTM5Q13571 262 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 KSR1Q8IVT5 923 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 COPS5Q92905 334 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 TRIM55Q9BYV6 548 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 EPN3Q9H201 632 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 NKX2-4Q9H2Z4 354 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 ZNF552Q9H707 407 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 CYP26B1Q9NR63 512 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 LRP2BPQ9P2M1 347 aa6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 ARID1BQ8NFD5 2236 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-211ENST00000534216 A0A1W2PQ27 194 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 A0A1W2PQ64 194 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 A0A1W2PQC6 194 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 A0A1W2PQD8 194 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 MSL3P1P0C860 447 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 SDHBP21912 280 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 L1CAMP32004 1257 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 ARL4AP40617 200 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 CORO7P57737 925 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 ZNF605Q86T29 641 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 BTN2A2Q8WVV5 523 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 SLC38A3Q99624 504 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 TNFRSF12AQ9NP84 129 aa6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 PPP1R1BQ9UD71 204 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-211ENST00000534216 NPHP3-ACAD11A0A0J9YXS1 232 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 THBDP07204 575 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 PAMP19021 973 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 GTF2F1P35269 517 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 CYP4F3Q08477 520 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 NBPF6Q5VWK0 638 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 NLGN2Q8NFZ4 835 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 ARMC5Q96C12 935 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 NBPF4Q96M43 638 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 SLC26A8Q96RN1 970 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 GPRC5CQ9NQ84 441 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 CLEC1BQ9P126 229 aa6.24□□□□□ -1.41
ATPAF1-211ENST00000534216 TRBV23OR9-2A0A075B6M9 112 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 MYOCOSA0A1B0GUC4 107 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 PEX10O60683 326 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 CAPNS1P04632 268 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 MPOP05164 745 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 PLS3P13797 630 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 YBX3P16989 372 aaKnown RBP eCLIP6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 HOXC12P31275 282 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 YBX1P67809 324 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 NPM2Q86SE8 214 aaKnown RBP6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 CPNE8Q86YQ8 564 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 BHLHE22Q8NFJ8 381 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 FRS2Q8WU20 508 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 HIRIP3Q9BW71 556 aaPredicted RBP6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 MCOLN1Q9GZU1 580 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 PDLIM7Q9NR12 457 aa6.23□□□□□ -1.41
ATPAF1-211ENST00000534216 A0A1W2PQU0 124 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 HRKO00198 91 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 AGRPO00253 132 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 SCG5P05408 212 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 RBL2Q08999 1139 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 ZNF124Q15973 351 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 ST13P5Q8NFI4 369 aaPredicted RBP6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 NPLOC4Q8TAT6 608 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 CCDC140Q96MF4 163 aa6.22□□□□□ -1.41
ATPAF1-211ENST00000534216 PPP1R16BQ96T49 567 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms