RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 FBXO18Q8NFZ0 1043 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 VCPKMTQ9H867 229 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 SEC63Q9UGP8 760 aaKnown RBP12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 MTMR6Q9Y217 621 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 PHIPQ8WWQ0 1821 aa12.61□□□□□ -0.39
CCDC90B-218ENST00000533761 CCL15-CCL14A0A0B4J2E2 113 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 RAD21O60216 631 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 MAP2K2P36507 400 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 SREBF2Q12772 1141 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 PKP1Q13835 747 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 NFKBIBQ15653 356 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 ZYXQ15942 572 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 CCL15Q16663 113 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 ATL3Q6DD88 541 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 PACS2Q86VP3 889 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 LRRC47Q8N1G4 583 aaKnown RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 PROCA1Q8NCQ7 364 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 DCAF4Q8WV16 495 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 PHKBQ93100 1093 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 C12orf42Q96LP6 360 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 MYH4Q9Y623 1939 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 VEGFBP49765 207 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 MCTP1Q6DN14 999 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 TRIM67Q6ZTA4 783 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 BRAPQ7Z569 592 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 SPZ1Q9BXG8 430 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
CCDC90B-218ENST00000533761 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 PALM3A6NDB9 673 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 KLRF2D3W0D1 207 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 BAG4O95429 457 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 PDHBP11177 359 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 NCLP19338 710 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 MCM4P33991 863 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 SLC1A4P43007 532 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 KRT85P78386 507 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 PABPC4Q13310 644 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 OTUD7BQ6GQQ9 843 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 GADL1Q6ZQY3 521 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 SPICE1Q8N0Z3 855 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 CCDC148Q8NFR7 591 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 MAD2L2Q9UI95 211 aa12.59□□□□□ -0.39
CCDC90B-218ENST00000533761 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 WDR46O15213 610 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 NDUFB10O96000 172 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 VCAM1P19320 739 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 CALML3P27482 149 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 TM4SF4P48230 202 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 TRAF1Q13077 416 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 CCDC96Q2M329 555 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 SKOR2Q2VWA4 1001 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 FOXD4L5Q5VV16 416 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 NBPF11Q86T75 865 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 FOXD4L4Q8WXT5 416 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 BRI3BPQ8WY22 251 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 GMCL1Q96IK5 515 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 ZNF396Q96N95 335 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 SCAND2PQ9GZW5 306 aaPredicted RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 SH3GLB2Q9NR46 395 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 ISY1Q9ULR0 285 aaKnown RBP12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 AGTPBP1Q9UPW5 1226 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 MTMR7Q9Y216 660 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 ZDHHC9Q9Y397 364 aa12.58□□□□□ -0.4
CCDC90B-218ENST00000533761 PTPRFP10586 1907 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 AOC2O75106 756 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 PLEKHA8P1O95397 391 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 SCG2P13521 617 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 PFKFB3Q16875 520 aaPredicted RBP12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 GALNT17Q6IS24 598 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 ANKRD23Q86SG2 305 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 ZCCHC17Q9NP64 241 aaKnown RBP12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 SLC45A1Q9Y2W3 748 aa12.57□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 BMP3P12645 472 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 HOXA7P31268 230 aaPredicted RBP12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 FUT2Q10981 343 aa12.56□□□□□ -0.4
CCDC90B-218ENST00000533761 DGKZQ13574 1117 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms