RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 A0A1B0GVL5 298 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 ECE1P42892 770 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 TUBB4BP68371 445 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 ITPK1Q13572 414 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 PPP1R18Q6NYC8 613 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 CEP57Q86XR8 500 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 FAM167AQ96KS9 214 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 NUCKS1Q9H1E3 243 aaKnown RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 DNA2P51530 1060 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 HHIPL2Q6UWX4 724 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 GBP6Q6ZN66 633 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 KCTD1Q719H9 257 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 SH3RF3Q8TEJ3 882 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 ATRIPQ8WXE1 791 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 NACC1Q96RE7 527 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 CDC37Q16543 378 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 CCDC84Q86UT8 332 aaPredicted RBP12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 OSBP2Q969R2 916 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 DNAJC25Q9H1X3 360 aa12.46□□□□□ -0.41
AMBRA1-211ENST00000533727 TNS2Q63HR2 1409 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 RICTORQ6R327 1708 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 C19orf81C9J6K1 198 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 ATP2C2O75185 946 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 PSAPP07602 524 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 GAP43P17677 238 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 STX17P56962 302 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 TBC1D8BQ0IIM8 1120 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 RAPGEF1Q13905 1077 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 ALX1Q15699 326 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.42
AMBRA1-211ENST00000533727 NTSR2O95665 410 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 TNFAIP3P21580 790 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PRDX5P30044 214 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 HDLBPQ00341 1268 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 NBPF11Q86T75 865 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 TSGA10Q9BZW7 698 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 IKBKGQ9Y6K9 419 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 OPA1O60313 960 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 GAS8O95995 478 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 ADD1P35611 737 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 RNF207Q6ZRF8 634 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 SREK1Q8WXA9 508 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 RNF34Q969K3 372 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PUS7LQ9H0K6 701 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 SH3GLB2Q9NR46 395 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 WDR19Q8NEZ3 1342 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 FSD2A1L4K1 749 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PLSCR1O15162 318 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PRPF3O43395 683 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 ZSCAN20P17040 1043 aaPredicted RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 DEFB132Q7Z7B7 95 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 IFNAR1P17181 557 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 PARK7Q99497 189 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 CTNND2Q9UQB3 1225 aa12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
AMBRA1-211ENST00000533727 SYNRGQ9UMZ2 1314 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 SH2B2O14492 632 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 PRKAB2O43741 272 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 TUBBP07437 444 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 KRT19P08727 400 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 CCDC14Q49A88 953 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 SEPT14Q6ZU15 432 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 SPATA24Q86W54 205 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 KIAA1524Q8TCG1 905 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 FBF1Q8TES7 1133 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 VPS33BQ9H267 617 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 VPS18Q9P253 973 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 PXDNLA1KZ92 1463 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 TNNI1P19237 187 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 STXBP2Q15833 593 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 RNF169Q8NCN4 708 aa12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
AMBRA1-211ENST00000533727 CYP21A2P08686 494 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms