RNA–Protein interactions for RNA: ENST00000533507.5

NDUFS3-211, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-211ENST00000533507 FAM177A1Q8N128 213 aaPredicted RBP30.38■■■□□ 2.45
NDUFS3-211ENST00000533507 MRPL11Q9Y3B7 192 aaKnown RBP30.38■■■□□ 2.45
NDUFS3-211ENST00000533507 RLFQ13129 1914 aa30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 MANSC4A6NHS7 340 aaPredicted RBP30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 U2AF2P26368 475 aaKnown RBP eCLIP30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 SNRNP48Q6IEG0 339 aaKnown RBP30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 CYP4F22Q6NT55 531 aa30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 BRAPQ7Z569 592 aa30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 SMCR8Q8TEV9 937 aaPredicted RBP30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 RIC8AQ9NPQ8 531 aa30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 SMCHD1A6NHR9 2005 aa30.37■■■□□ 2.45
NDUFS3-211ENST00000533507 ABCB11O95342 1321 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 ESYT2A0FGR8 921 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 ANKRD23Q86SG2 305 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 FAM43AQ8N2R8 423 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 PEX10O60683 326 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 DNM1Q05193 864 aaKnown RBP30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 UBE2SQ16763 222 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 JAKMIP3Q5VZ66 844 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 REXO1Q8N1G1 1221 aaKnown RBP30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 PTPN18Q99952 460 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 PCDHA6Q9UN73 950 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 PCDHA8Q9Y5H6 950 aa30.36■■■□□ 2.45
NDUFS3-211ENST00000533507 PIK3AP1Q6ZUJ8 805 aa30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 DAGLBQ8NCG7 672 aa30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 REPS2Q8NFH8 660 aa30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 HHIPL1Q96JK4 782 aa30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 CREBZFQ9NS37 354 aa30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 COL11A1P12107 1806 aaPredicted RBP30.35■■■□□ 2.45
NDUFS3-211ENST00000533507 CCDC194A0A1B0GVG4 234 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 FAM155AB1AL88 458 aaPredicted RBP30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 CFBP00751 764 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 STAT3P40763 770 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 DEFB115Q30KQ5 88 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 USP17L6PQ6QN14 398 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 LBX2Q6XYB7 198 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 MB21D1Q8N884 522 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 GBP4Q96PP9 640 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 TMEM260Q9NX78 707 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 PNMA2Q9UL42 364 aa30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 ZNF214Q9UL59 606 aaPredicted RBP30.34■■■□□ 2.45
NDUFS3-211ENST00000533507 ATP2B1P20020 1258 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 OAZ1P54368 228 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 TRERF1Q96PN7 1200 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 TEX13BQ9BXU2 312 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 GLT8D2Q9H1C3 349 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 BTBD7Q9P203 1132 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 TFIP11Q9UBB9 837 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 BAG4O95429 457 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 CEBPZQ03701 1054 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 NOM1Q5C9Z4 860 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 EARS2Q5JPH6 523 aaKnown RBP30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 SLC45A1Q9Y2W3 748 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 RIPK3Q9Y572 518 aa30.33■■■□□ 2.45
NDUFS3-211ENST00000533507 MYSM1Q5VVJ2 828 aa30.32■■■□□ 2.44
NDUFS3-211ENST00000533507 FAM205CA6NFA0 338 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 HOXA13P31271 388 aaPredicted RBP30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 PGBD1Q96JS3 809 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 TESPA1A2RU30 521 aaPredicted RBP30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 MUM1L1Q5H9M0 696 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 POTEEQ6S8J3 1075 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 TBC1D5Q92609 795 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 ZNF396Q96N95 335 aaPredicted RBP30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 RNF146Q9NTX7 359 aa30.31■■■□□ 2.44
NDUFS3-211ENST00000533507 M0R2N6 131 aa30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 OPLAHO14841 1288 aa30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 INHBEP58166 350 aa30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 TNFRSF25Q93038 417 aa30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 PARK7Q99497 189 aaKnown RBP30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 CNPY2Q9Y2B0 182 aa30.3■■■□□ 2.44
NDUFS3-211ENST00000533507 GCOM1H8Y6P7 765 aaPredicted RBP30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 NFIBO00712 420 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 ATP2A1O14983 1001 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 POLR2MP0CAP2 368 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 KRT85P78386 507 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 SREBF2Q12772 1141 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 RBPJLQ9UBG7 517 aa30.29■■■□□ 2.44
NDUFS3-211ENST00000533507 IGF2BP3O00425 579 aaKnown RBP eCLIP30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 MEIS2O14770 477 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 KRT25Q7Z3Z0 450 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 FCHSD1Q86WN1 690 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 MCF2L2Q86YR7 1114 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 ZIC5Q96T25 663 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 SPATC1LQ9H0A9 340 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 TXNRD2Q9NNW7 524 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 NOL7Q9UMY1 257 aaKnown RBP30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 FIBPO43427 364 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 NCAPG2Q86XI2 1143 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 CLEC4DQ8WXI8 215 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 GDPD2Q9HCC8 539 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 RABGAP1Q9Y3P9 1069 aa30.28■■■□□ 2.44
NDUFS3-211ENST00000533507 SPDYE3A6NKU9 549 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 NONOQ15233 471 aaKnown RBP eCLIP30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 INF2Q27J81 1249 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 NSMFQ6X4W1 530 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 IFNL1Q8IU54 200 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 ANKRD13CQ8N6S4 541 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 CAPNS2Q96L46 248 aa30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 FTOQ9C0B1 505 aaKnown RBP eCLIP30.27■■■□□ 2.44
NDUFS3-211ENST00000533507 CFAP45Q9UL16 551 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms