RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 TM4SF20Q53R12 229 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
C11orf54-212ENST00000533154 SHISA5Q8N114 240 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 STAG1Q8WVM7 1258 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 KLHL6Q8WZ60 621 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 NINJ1Q92982 152 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 KLHDC7BQ96G42 594 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 SLC38A3Q99624 504 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 RNF208Q9H0X6 261 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 PAK6Q9NQU5 681 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-212ENST00000533154 ZNF214Q9UL59 606 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-212ENST00000533154 PCDHGC5Q9Y5F6 944 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 CD2APQ9Y5K6 639 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-212ENST00000533154 PIK3C2BO00750 1634 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 PRDM15P57071 1507 aaPredicted RBP6.86□□□□□ -1.31
C11orf54-212ENST00000533154 MAP3K1Q13233 1512 aa6.86□□□□□ -1.31
C11orf54-212ENST00000533154 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 TMEM2Q9UHN6 1383 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 PGRP06401 933 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 CTSBP07858 339 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 FAM153BP0C7A2 387 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 NAT2P11245 290 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 HCLS1P14317 486 aaPredicted RBP6.85□□□□□ -1.31
C11orf54-212ENST00000533154 SLC7A5Q01650 507 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 IDI1Q13907 227 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 PDE3AQ14432 1141 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 CPSF6Q16630 551 aaKnown RBP eCLIP6.85□□□□□ -1.31
C11orf54-212ENST00000533154 BBS9Q3SYG4 887 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 SLFN12Q8IYM2 578 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 RUSC1Q9BVN2 902 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 WNT10AQ9GZT5 417 aa6.85□□□□□ -1.31
C11orf54-212ENST00000533154 TMEM94Q12767 1356 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 AGRPO00253 132 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 PARNO95453 639 aaKnown RBP6.84□□□□□ -1.31
C11orf54-212ENST00000533154 S100BP04271 92 aaPredicted RBP6.84□□□□□ -1.31
C11orf54-212ENST00000533154 PDGFRBP09619 1106 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 STAT3P40763 770 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 ERVK-24P63145 666 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 KIAA1211LQ6NV74 962 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 NIM1KQ8IY84 436 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 ACSF2Q96CM8 615 aaPredicted RBP6.84□□□□□ -1.31
C11orf54-212ENST00000533154 IPO9Q96P70 1041 aaKnown RBP6.84□□□□□ -1.31
C11orf54-212ENST00000533154 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 EID1Q9Y6B2 187 aa6.84□□□□□ -1.31
C11orf54-212ENST00000533154 FAM135BQ49AJ0 1406 aa6.84□□□□□ -1.32
C11orf54-212ENST00000533154 ERBINQ96RT1 1412 aa6.84□□□□□ -1.32
C11orf54-212ENST00000533154 CROCC2H7BZ55 1655 aa6.84□□□□□ -1.32
C11orf54-212ENST00000533154 TET3O43151 1660 aa6.84□□□□□ -1.32
C11orf54-212ENST00000533154 PRAMEF27A3QJZ7 478 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 DCDC2CA8MYV0 355 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 FANCGO15287 622 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 KCNQ2O43526 872 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 RAG1P15918 1043 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 KCNA6P17658 529 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 LIG1P18858 919 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 GRK4P32298 578 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
C11orf54-212ENST00000533154 NLRP12P59046 1061 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 NFKBIBQ15653 356 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 GLIPR1L2Q4G1C9 344 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 THNSL2Q86YJ6 484 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 DHRS1Q96LJ7 313 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 METTL22Q9BUU2 404 aaPredicted RBP6.83□□□□□ -1.32
C11orf54-212ENST00000533154 WDR18Q9BV38 432 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 DAPK1P53355 1430 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 PTPN23Q9H3S7 1636 aa6.83□□□□□ -1.32
C11orf54-212ENST00000533154 EFCAB6Q5THR3 1501 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 LOC100289279A0A1B0GTE1 492 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 SLFN14P0C7P3 912 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 ANP32AP39687 249 aaKnown RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 PMS1P54277 932 aaKnown RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 GNPTABQ3T906 1256 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 FNDC3BQ53EP0 1204 aaKnown RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 LILRA6Q6PI73 481 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 MCATQ8IVS2 390 aaKnown RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 MRPL41Q8IXM3 137 aaKnown RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 SMARCC1Q92922 1105 aaPredicted RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 WDR89Q96FK6 387 aaPredicted RBP6.82□□□□□ -1.32
C11orf54-212ENST00000533154 KIF2CQ99661 725 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 NOS1P29475 1434 aa6.82□□□□□ -1.32
C11orf54-212ENST00000533154 LMTK2Q8IWU2 1503 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 NCANO14594 1321 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 KDM5AP29375 1690 aaKnown RBP6.81□□□□□ -1.32
C11orf54-212ENST00000533154 ROBO1Q9Y6N7 1651 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 CHURC1-FNTBB4DL54 471 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 PRRG2O14669 202 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 RGS13O14921 159 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 PLD2O14939 933 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 ANP32CO43423 234 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 AOC2O75106 756 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 SOX5P35711 763 aa6.81□□□□□ -1.32
C11orf54-212ENST00000533154 ETF1P62495 437 aaKnown RBP6.81□□□□□ -1.32
C11orf54-212ENST00000533154 PABPC4Q13310 644 aaKnown RBP eCLIP6.81□□□□□ -1.32
C11orf54-212ENST00000533154 HSP90AB2PQ58FF8 381 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms