RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SHISA4Q96DD7 197 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 PIGSQ96S52 555 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 TDRD3Q9H7E2 651 aaKnown RBP13.91□□□□□ -0.18
CHD7-211ENST00000532149 JMJD4Q9H9V9 463 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
CHD7-211ENST00000532149 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 VWA3AA6NCI4 1184 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 DDTLA6NHG4 134 aaPredicted RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 PSMD14O00487 310 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 OR52Z1P0C646 297 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 EEF2P13639 858 aaKnown RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 MCM7P33993 719 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 TERF1P54274 439 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 MORC3Q14149 939 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 SAMD3Q8N6K7 520 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 GPKOWQ92917 476 aaPredicted RBP eCLIP13.9□□□□□ -0.18
CHD7-211ENST00000532149 PRMT6Q96LA8 375 aaPredicted RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 AMNQ9BXJ7 453 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHD7-211ENST00000532149 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 ZNF70Q9UC06 446 aaPredicted RBP13.9□□□□□ -0.18
CHD7-211ENST00000532149 SERTAD1Q9UHV2 236 aa13.9□□□□□ -0.18
CHD7-211ENST00000532149 GOLGA8HP0CJ92 632 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 TCP10Q12799 353 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 KCNB1Q14721 858 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 DPCR1Q3MIW9 517 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 EARS2Q5JPH6 523 aaKnown RBP13.89□□□□□ -0.19
CHD7-211ENST00000532149 C11orf57Q6ZUT1 292 aaPredicted RBP13.89□□□□□ -0.19
CHD7-211ENST00000532149 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 AOPEPQ8N6M6 819 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 ZBED3Q96IU2 234 aaPredicted RBP13.89□□□□□ -0.19
CHD7-211ENST00000532149 MAF1Q9H063 256 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 PSTPIP2Q9H939 334 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
CHD7-211ENST00000532149 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
CHD7-211ENST00000532149 F5H6K3 240 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 TBX3O15119 743 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 TUBB4AP04350 444 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 ASNSP08243 561 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 FDX1P10109 184 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 BMP3P12645 472 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 CLK2P49760 499 aaKnown RBP13.88□□□□□ -0.19
CHD7-211ENST00000532149 ZNF280AP59817 542 aaPredicted RBP13.88□□□□□ -0.19
CHD7-211ENST00000532149 KLRC3Q07444 240 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 PNOCQ13519 176 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 STIM1Q13586 685 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 SEPT2Q15019 361 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 INF2Q27J81 1249 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 LRRC47Q8N1G4 583 aaKnown RBP13.88□□□□□ -0.19
CHD7-211ENST00000532149 CALML4Q96GE6 196 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 PAGE5Q96GU1 130 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 DNAJC18Q9H819 358 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 VAT1LQ9HCJ6 419 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 DISC1Q9NRI5 854 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
CHD7-211ENST00000532149 CCNT1O60563 726 aaKnown RBP13.87□□□□□ -0.19
CHD7-211ENST00000532149 STAT6P42226 847 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 EIF6P56537 245 aaKnown RBP13.87□□□□□ -0.19
CHD7-211ENST00000532149 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 SPAG1Q07617 926 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 DPYDQ12882 1025 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 E2F4Q16254 413 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 SLC35G1Q2M3R5 365 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 TYW1BQ6NUM6 668 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 EFCAB3Q8N7B9 438 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 ANKRD20A12PQ8NF67 263 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 DHX58Q96C10 678 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 UBA5Q9GZZ9 404 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 GPCPD1Q9NPB8 672 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 MAN1B1Q9UKM7 699 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 SIPA1L1O43166 1804 aa13.87□□□□□ -0.19
CHD7-211ENST00000532149 CYP3A7-CYP3A51PA0A087WV96 503 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 CYP3A7P24462 503 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 KCNJ6P48051 423 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 CXCL9Q07325 125 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 ZFPM1Q8IX07 1006 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 IGSF22Q8N9C0 903 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 EPSTI1Q96J88 318 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 NT5C3AQ9H0P0 336 aa13.86□□□□□ -0.19
CHD7-211ENST00000532149 ZNF277Q9NRM2 450 aaPredicted RBP13.86□□□□□ -0.19
CHD7-211ENST00000532149 MAP3K20Q9NYL2 800 aaKnown RBP13.86□□□□□ -0.19
CHD7-211ENST00000532149 BRCA1P38398 1863 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms