RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 FAM156AQ8NDB6 213 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 ANP32BQ92688 251 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 USP13Q92995 863 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 TM9SF2Q99805 663 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 CEP44Q9C0F1 390 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 DHX36Q9H2U1 1008 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 ANTXR1Q9H6X2 564 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 VTA1Q9NP79 307 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 CDC23Q9UJX2 597 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 LHX6Q9UPM6 363 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 TMEM98Q9Y2Y6 226 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 PCDHB3Q9Y5E6 796 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 PCDHB14Q9Y5E9 798 aa6.06□□□□□ -1.44
ECHDC1-222ENST00000531967 A0A1W2PP55 124 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 POTEMA6NI47 508 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 B4E171 279 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 AGRPO00253 132 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 CILPO75339 1184 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 KRT9P35527 623 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 SCNN1BP51168 640 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 CENPCQ03188 943 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 CFAP100Q494V2 611 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 POTEGQ6S5H5 508 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ENOSF1Q7L5Y1 443 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 MAP4K3Q8IVH8 894 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 NRSN1Q8IZ57 195 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 SLC30A5Q8TAD4 765 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ADAMTS18Q8TE60 1221 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 TTLL2Q9BWV7 592 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 MIR1-1HGQ9H1L0 117 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 VPS11Q9H270 941 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 BRD9Q9H8M2 597 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 VPS45Q9NRW7 570 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 PCDHB5Q9Y5E4 795 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 GOLGA6L22H0YM25 854 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 KHNYNO15037 678 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ATMINO43313 823 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 FRS3O43559 492 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 HRGP04196 525 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 PPM1AP35813 382 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 HTRA3P83110 453 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ZNF267Q14586 743 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 LLGL1Q15334 1064 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 FAM98CQ17RN3 349 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 INTS6LQ5JSJ4 861 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 RRP12Q5JTH9 1297 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ISM2Q6H9L7 571 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 UNC5DQ6UXZ4 953 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 OR2C3Q8N628 320 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 C1orf127Q8N9H9 656 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 ZSCAN1Q8NBB4 408 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 L3MBTL2Q969R5 705 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 RIPOR3Q96MK2 946 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 FAM204AQ9H8W3 233 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 LATS2Q9NRM7 1088 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 MKL2Q9ULH7 1088 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 SMC3Q9UQE7 1217 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 IKBKGQ9Y6K9 419 aa6.05□□□□□ -1.44
ECHDC1-222ENST00000531967 H0Y3Z8 333 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 HTATSF1O43719 755 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 DNTTP04053 509 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 MUTP22033 750 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 HPDP32754 393 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 STAT1P42224 750 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 KRT85P78386 507 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 IFIT5Q13325 482 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 CCDC38Q502W7 563 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 MFSD4BQ5TF39 518 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 KIAA1211LQ6NV74 962 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 CCDC149Q6ZUS6 474 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 CENPIQ92674 756 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 FERMT2Q96AC1 680 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 SLC52A2Q9HAB3 445 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 GPRC5BQ9NZH0 403 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 EPS15L1Q9UBC2 864 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 POLHQ9Y253 713 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 USP20Q9Y2K6 914 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 SLC12A7Q9Y666 1083 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 LTBP3Q9NS15 1303 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 UBAP1LF5GYI3 381 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 GNRH1P01148 92 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 RPL17P18621 184 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 POLR2BP30876 1174 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 IGFALSP35858 605 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 GRIK1P39086 918 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 SSR1P43307 286 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 MAN2A2P49641 1150 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 VEGFBP49765 207 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 KCNC4Q03721 635 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 PPP2R5BQ15173 497 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 ZYXQ15942 572 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 PGM2L1Q6PCE3 622 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 NEK10Q6ZWH5 1172 aa6.04□□□□□ -1.44
ECHDC1-222ENST00000531967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.04□□□□□ -1.445e-7■■■□□ 18.9
ECHDC1-222ENST00000531967 C7orf31Q8N865 590 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms