RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 C9orf50Q5SZB4 431 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 IQSEC1Q6DN90 963 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 MFSD6Q6ZSS7 791 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 PLEKHM2Q8IWE5 1019 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 MAF1Q9H063 256 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 RNF41Q9H4P4 317 aaPredicted RBP15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 TBX21Q9UL17 535 aa15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 ISY1Q9ULR0 285 aaKnown RBP15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 GNEQ9Y223 722 aaKnown RBP15.71■□□□□ 0.11
AMBRA1-210ENST00000531542 ASTN1O14525 1302 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 TRIM6-TRIM34B2RNG4 842 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 CABYRO75952 493 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 SNHG28P0DPA3 235 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 TNFAIP2Q03169 654 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 MUM1L1Q5H9M0 696 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 GNASQ5JWF2 1037 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
AMBRA1-210ENST00000531542 A0A0U1RQG5 324 aaPredicted RBP15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 ARVCFO00192 962 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 HIP1O00291 1037 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 TIMP1P01033 207 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 IGHDP01880 384 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 PDHBP11177 359 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 FPGSQ05932 587 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 CCDC174Q6PII3 467 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 DGKHQ86XP1 1220 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 SLC43A3Q8NBI5 491 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 RILPL2Q969X0 211 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 GUCD1Q96NT3 240 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 VTA1Q9NP79 307 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 TOMM22Q9NS69 142 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 ADD3Q9UEY8 706 aaKnown RBP15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 A0A0C4DFX4 3053 aa15.69■□□□□ 0.1
AMBRA1-210ENST00000531542 WDR19Q8NEZ3 1342 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 TMEM265A0A087WTH1 108 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 ZNF543Q08ER8 600 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 RRP12Q5JTH9 1297 aaKnown RBP15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 GPATCH4Q5T3I0 446 aaKnown RBP15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 ZNF697Q5TEC3 545 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 TTBK2Q6IQ55 1244 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 TAPT1Q6NXT6 567 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 RASGRP2Q7LDG7 609 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 ANKS1AQ92625 1134 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 ESR2Q92731 530 aa15.68■□□□□ 0.1
AMBRA1-210ENST00000531542 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 ZNF213O14771 459 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 CD4P01730 458 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 SLC16A2P36021 539 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 EPHB4P54760 987 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 SNAP25P60880 206 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 MFSD5Q6N075 450 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 FAM126BQ8IXS8 530 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 RGS22Q8NE09 1264 aa15.67■□□□□ 0.1
AMBRA1-210ENST00000531542 RBM47A0AV96 593 aaKnown RBP15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 ZEB2O60315 1214 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 SMPD1P17405 629 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 HAND2P61296 217 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 IRX5P78411 483 aaPredicted RBP15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 FSCN1Q16658 493 aaKnown RBP15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 B4GALNT3Q6L9W6 998 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 NSMFQ6X4W1 530 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 CLEC4DQ8WXI8 215 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 RNPC3Q96LT9 517 aaKnown RBP15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 DSCC1Q9BVC3 393 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 AP5M1Q9H0R1 490 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 SEMA6BQ9H3T3 888 aa15.66■□□□□ 0.1
AMBRA1-210ENST00000531542 NFIBO00712 420 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 BAATQ14032 418 aaPredicted RBP15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 DUSP28Q4G0W2 176 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 DNERQ8NFT8 737 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 VTI1AQ96AJ9 217 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 GPCPD1Q9NPB8 672 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 MTMR7Q9Y216 660 aa15.65■□□□□ 0.1
AMBRA1-210ENST00000531542 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 DYNC1LI2O43237 492 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 EDNRBP24530 442 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 ALDH5A1P51649 535 aaPredicted RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 BEX3Q00994 111 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 PPIGQ13427 754 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■■□□□ 12.6
AMBRA1-210ENST00000531542 RASIP1Q5U651 963 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 CWC27Q6UX04 472 aaKnown RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 NOL8Q76FK4 1167 aaKnown RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 IQCA1Q86XH1 822 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 TMEM199Q8N511 208 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 MPHOSPH6Q99547 160 aaKnown RBP15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 PDGFCQ9NRA1 345 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 DIAPH3Q9NSV4 1193 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 CTNNA3Q9UI47 895 aa15.64■□□□□ 0.09
AMBRA1-210ENST00000531542 NEDD4P46934 1319 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms