RNA–Protein interactions for RNA: ENST00000531461.5

ACER3-211, Transcript of alkaline ceramidase 3, humanhuman

TSL 2

Gene ACER3, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-211ENST00000531461 CCDC174Q6PII3 467 aa28.35■■■□□ 2.13
ACER3-211ENST00000531461 RNPC3Q96LT9 517 aaKnown RBP28.35■■■□□ 2.13
ACER3-211ENST00000531461 FAM161BQ96MY7 647 aa28.35■■■□□ 2.13
ACER3-211ENST00000531461 RANBP17Q9H2T7 1088 aaKnown RBP28.35■■■□□ 2.13
ACER3-211ENST00000531461 ASTN1O14525 1302 aa28.35■■■□□ 2.13
ACER3-211ENST00000531461 EYSQ5T1H1 3165 aa28.35■■■□□ 2.13
ACER3-211ENST00000531461 HSPD1P10809 573 aaKnown RBP28.34■■■□□ 2.13
ACER3-211ENST00000531461 TOP1P11387 765 aaKnown RBP28.34■■■□□ 2.13
ACER3-211ENST00000531461 PCP11498 1178 aaKnown RBP28.34■■■□□ 2.13
ACER3-211ENST00000531461 MUM1L1Q5H9M0 696 aa28.34■■■□□ 2.13
ACER3-211ENST00000531461 RASGRP2Q7LDG7 609 aa28.34■■■□□ 2.13
ACER3-211ENST00000531461 CCPG1Q9ULG6 757 aa28.34■■■□□ 2.13
ACER3-211ENST00000531461 CUL9Q8IWT3 2517 aa28.34■■■□□ 2.13
ACER3-211ENST00000531461 MFSD5Q6N075 450 aa28.33■■■□□ 2.13
ACER3-211ENST00000531461 MORC4Q8TE76 937 aa28.33■■■□□ 2.13
ACER3-211ENST00000531461 CDX2Q99626 313 aaPredicted RBP28.33■■■□□ 2.13
ACER3-211ENST00000531461 Q9Y3F1 56 aa28.33■■■□□ 2.13
ACER3-211ENST00000531461 LOC102724159A0A0B4J2E5 919 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.32■■■□□ 2.12
ACER3-211ENST00000531461 CABYRO75952 493 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 PWP2Q15269 919 aaKnown RBP28.32■■■□□ 2.12
ACER3-211ENST00000531461 CCDC96Q2M329 555 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 FAM126BQ8IXS8 530 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 CHMP4CQ96CF2 233 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 TMEM47Q9BQJ4 181 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 SEZ6LQ9BYH1 1024 aa28.32■■■□□ 2.12
ACER3-211ENST00000531461 SNAP25P60880 206 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 IQSEC1Q6DN90 963 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 TLK2Q86UE8 772 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 ZNF589Q86UQ0 364 aaPredicted RBP28.31■■■□□ 2.12
ACER3-211ENST00000531461 SMC5Q8IY18 1101 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 SLC43A3Q8NBI5 491 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 VTI1AQ96AJ9 217 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 TTC14Q96N46 770 aa28.31■■■□□ 2.12
ACER3-211ENST00000531461 TTYH1Q9H313 450 aaPredicted RBP28.31■■■□□ 2.12
ACER3-211ENST00000531461 CCDC171Q6TFL3 1326 aa28.3■■■□□ 2.12
ACER3-211ENST00000531461 NMIQ13287 307 aaPredicted RBP28.3■■■□□ 2.12
ACER3-211ENST00000531461 TAPT1Q6NXT6 567 aa28.3■■■□□ 2.12
ACER3-211ENST00000531461 VTA1Q9NP79 307 aa28.3■■■□□ 2.12
ACER3-211ENST00000531461 TOMM22Q9NS69 142 aa28.3■■■□□ 2.12
ACER3-211ENST00000531461 PNMA2Q9UL42 364 aa28.3■■■□□ 2.12
ACER3-211ENST00000531461 TLR3O15455 904 aaKnown RBP28.29■■■□□ 2.12
ACER3-211ENST00000531461 CD4P01730 458 aa28.29■■■□□ 2.12
ACER3-211ENST00000531461 SMPD1P17405 629 aa28.29■■■□□ 2.12
ACER3-211ENST00000531461 PPIGQ13427 754 aaKnown RBP eCLIP28.29■■■□□ 2.12
ACER3-211ENST00000531461 FSCN1Q16658 493 aaKnown RBP28.29■■■□□ 2.12
ACER3-211ENST00000531461 SYDE2Q5VT97 1194 aa28.29■■■□□ 2.12
ACER3-211ENST00000531461 TTBK2Q6IQ55 1244 aa28.29■■■□□ 2.12
ACER3-211ENST00000531461 MTMR7Q9Y216 660 aa28.29■■■□□ 2.12
ACER3-211ENST00000531461 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.28■■■□□ 2.12
ACER3-211ENST00000531461 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.28■■■□□ 2.12
ACER3-211ENST00000531461 NT5C2P49902 561 aa28.28■■■□□ 2.12
ACER3-211ENST00000531461 BEX3Q00994 111 aa28.28■■■□□ 2.12
ACER3-211ENST00000531461 RRP12Q5JTH9 1297 aaKnown RBP28.28■■■□□ 2.12
ACER3-211ENST00000531461 AKNAD1Q5T1N1 836 aa28.28■■■□□ 2.12
ACER3-211ENST00000531461 NSMFQ6X4W1 530 aa28.28■■■□□ 2.12
ACER3-211ENST00000531461 NOL8Q76FK4 1167 aaKnown RBP28.28■■■□□ 2.12
ACER3-211ENST00000531461 LNPKQ9C0E8 428 aa28.28■■■□□ 2.12
ACER3-211ENST00000531461 ADD3Q9UEY8 706 aaKnown RBP28.28■■■□□ 2.12
ACER3-211ENST00000531461 ZEB2O60315 1214 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 PDHBP11177 359 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 SLC16A2P36021 539 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 MFAP1P55081 439 aaKnown RBP28.27■■■□□ 2.12
ACER3-211ENST00000531461 MFSD6Q6ZSS7 791 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.27■■■□□ 2.12
ACER3-211ENST00000531461 TMEM199Q8N511 208 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.27■■■□□ 2.12
ACER3-211ENST00000531461 AP5M1Q9H0R1 490 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 OSBPL3Q9H4L5 887 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 PRUNE2Q8WUY3 3088 aa28.27■■■□□ 2.12
ACER3-211ENST00000531461 TRIM6-TRIM34B2RNG4 842 aa28.26■■■□□ 2.11
ACER3-211ENST00000531461 SNHG28P0DPA3 235 aa28.26■■■□□ 2.11
ACER3-211ENST00000531461 CXCL17Q6UXB2 119 aa28.26■■■□□ 2.11
ACER3-211ENST00000531461 FBXO16Q8IX29 292 aaPredicted RBP28.26■■■□□ 2.11
ACER3-211ENST00000531461 RWDD1Q9H446 243 aaPredicted RBP28.26■■■□□ 2.11
ACER3-211ENST00000531461 RNF41Q9H4P4 317 aaPredicted RBP28.26■■■□□ 2.11
ACER3-211ENST00000531461 PDGFCQ9NRA1 345 aa28.26■■■□□ 2.11
ACER3-211ENST00000531461 LAMA4Q16363 1823 aa28.25■■■□□ 2.11
ACER3-211ENST00000531461 DYNC1LI2O43237 492 aaPredicted RBP28.25■■■□□ 2.11
ACER3-211ENST00000531461 ZNF543Q08ER8 600 aa28.25■■■□□ 2.11
ACER3-211ENST00000531461 BAATQ14032 418 aaPredicted RBP28.25■■■□□ 2.11
ACER3-211ENST00000531461 TMEM240Q5SV17 173 aa28.25■■■□□ 2.11
ACER3-211ENST00000531461 RASIP1Q5U651 963 aa28.25■■■□□ 2.11
ACER3-211ENST00000531461 C16orf59Q7L2K0 433 aa28.25■■■□□ 2.11
ACER3-211ENST00000531461 SDSP20132 328 aa28.24■■■□□ 2.11
ACER3-211ENST00000531461 ALDH5A1P51649 535 aaPredicted RBP28.24■■■□□ 2.11
ACER3-211ENST00000531461 HAND2P61296 217 aa28.24■■■□□ 2.11
ACER3-211ENST00000531461 ITGA7Q13683 1181 aa28.24■■■□□ 2.11
ACER3-211ENST00000531461 EEPD1Q7L9B9 569 aa28.24■■■□□ 2.11
ACER3-211ENST00000531461 RILPL2Q969X0 211 aa28.24■■■□□ 2.11
ACER3-211ENST00000531461 DDX49Q9Y6V7 483 aaKnown RBP28.24■■■□□ 2.11
ACER3-211ENST00000531461 FRMPD2Q68DX3 1309 aaPredicted RBP28.23■■■□□ 2.11
ACER3-211ENST00000531461 WDR19Q8NEZ3 1342 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 NFIBO00712 420 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 CSF2RAP15509 400 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 DUSP28Q4G0W2 176 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 PSRC1Q6PGN9 363 aaPredicted RBP28.23■■■□□ 2.11
ACER3-211ENST00000531461 KIAA1211Q6ZU35 1233 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 TBC1D10CQ8IV04 446 aa28.23■■■□□ 2.11
ACER3-211ENST00000531461 CLEC4DQ8WXI8 215 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms