RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
LRRK1-207ENST00000531270 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
LRRK1-207ENST00000531270 KCNG1Q9UIX4 513 aa16■□□□□ 0.15
LRRK1-207ENST00000531270 PCDHB4Q9Y5E5 795 aa16■□□□□ 0.15
LRRK1-207ENST00000531270 HEXIM1O94992 359 aaKnown RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 CLTAP09496 248 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 RNASELQ05823 741 aaKnown RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 KRT33BQ14525 404 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 PDCD2Q16342 344 aaPredicted RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 ZNF790Q6PG37 636 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 GPKOWQ92917 476 aaPredicted RBP eCLIP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 TEKT3Q9BXF9 490 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 UBXN2AP68543 259 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 SUCLA2Q9P2R7 463 aaPredicted RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 ORC6Q9Y5N6 252 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 DPY19L2Q6NUT2 758 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 PPP1R16BQ96T49 567 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 SLC39A2Q9NP94 309 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 DDX25Q9UHL0 483 aaKnown RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 G3BP2Q9UN86 482 aaKnown RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 DPP9Q86TI2 863 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
LRRK1-207ENST00000531270 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 INHBAP08476 426 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 CERS3Q8IU89 383 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 FAM149B1Q96BN6 582 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 PHACTR3Q96KR7 559 aa15.99■□□□□ 0.15
LRRK1-207ENST00000531270 FBXW4P57775 412 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 PLA2G4DQ86XP0 818 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 BBS5Q8N3I7 341 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 SUCLG2Q96I99 432 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 XPO4Q9C0E2 1151 aaKnown RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 PRKAG2Q9UGJ0 569 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 HYOU1Q9Y4L1 999 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 NSFP46459 744 aaKnown RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 KIAA0825Q8IV33 1275 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 RTEL1Q9NZ71 1219 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 ARMCX3Q9UH62 379 aaPredicted RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 INPP5FQ9Y2H2 1132 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 MRPL11Q9Y3B7 192 aaKnown RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 SEC24BO95487 1268 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 SNX1Q13596 522 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 RNF168Q8IYW5 571 aaPredicted RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 PTPREP23469 700 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 PEX19P40855 299 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 RASIP1Q5U651 963 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 ANGPTL8Q6UXH0 198 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 TRIM58Q8NG06 486 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 TYW1Q9NV66 732 aaKnown RBP15.98■□□□□ 0.15
LRRK1-207ENST00000531270 MOSPD1Q9UJG1 213 aa15.98■□□□□ 0.15
LRRK1-207ENST00000531270 TRPA1O75762 1119 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 NESP48681 1621 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 DYNLT1P63172 113 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 MESDQ14696 234 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 KIAA1841Q6NSI8 718 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 SRGAP2BP0DMP2 458 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 NRBP2Q9NSY0 501 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 NPR1P16066 1061 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 MTRQ99707 1265 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 PNMA2Q9UL42 364 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 SYNDIG1LA6NDD5 238 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 USP17L12C9JPN9 530 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 USP17L21D6R901 530 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 IFNAR2P48551 515 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 TNFAIP1Q13829 316 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 ACBD5Q5T8D3 534 aaPredicted RBP15.97■□□□□ 0.15
LRRK1-207ENST00000531270 FAM160B1Q5W0V3 765 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 DNAAF3Q8N9W5 541 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 GJA10Q969M2 543 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 CCDC138Q96M89 665 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 SLC38A10Q9HBR0 1119 aa15.97■□□□□ 0.15
LRRK1-207ENST00000531270 CPSF3Q9UKF6 684 aaKnown RBP15.97■□□□□ 0.15
LRRK1-207ENST00000531270 HMGB1P1B2RPK0 211 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 LLGL1Q15334 1064 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 CERKLQ49MI3 558 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 METTL23Q86XA0 190 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 CCPG1Q9ULG6 757 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 MROH5Q6ZUA9 1318 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 E7EWF7 191 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 ADAM9Q13443 819 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 SNX25Q9H3E2 840 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 FAM8A1Q9UBU6 413 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 KAT6BQ8WYB5 2073 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 SCHIP1Q9P0W5 487 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 ARPP21Q9UBL0 812 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.96■□□□□ 0.15
LRRK1-207ENST00000531270 SDR42E1Q8WUS8 393 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 MIS12Q9H081 205 aa15.96■□□□□ 0.15
LRRK1-207ENST00000531270 GOLGA8KD6RF30 607 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms