RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 MFSD6Q6ZSS7 791 aa18.61■□□□□ 0.57
CPSF1-205ENST00000531042 PCSK9Q8NBP7 692 aaKnown RBP18.61■□□□□ 0.57
CPSF1-205ENST00000531042 TOX2Q96NM4 488 aa18.61■□□□□ 0.57
CPSF1-205ENST00000531042 CYP39A1Q9NYL5 469 aa18.61■□□□□ 0.57
CPSF1-205ENST00000531042 CCPG1Q9ULG6 757 aa18.61■□□□□ 0.57
CPSF1-205ENST00000531042 ASTN1O14525 1302 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 ELP1O95163 1332 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 ASGR1P07306 291 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 FAAP100Q0VG06 881 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 SYDE2Q5VT97 1194 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 TBC1D10CQ8IV04 446 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 GLT1D1Q96MS3 346 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 TTC14Q96N46 770 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 TMEM39AQ9NV64 488 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 LRRC37A2A6NM11 1700 aa18.6■□□□□ 0.57
CPSF1-205ENST00000531042 LCTP09848 1927 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 FRMPD2Q68DX3 1309 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-205ENST00000531042 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-205ENST00000531042 DCDC2CA8MYV0 355 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 CTAGE5O15320 804 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 RAG1P15918 1043 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 NKX3-2P78367 333 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 TNFAIP2Q03169 654 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 GNASQ5JWF2 1037 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 GPCPD1Q9NPB8 672 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 STXBP5LQ9Y2K9 1186 aa18.59■□□□□ 0.57
CPSF1-205ENST00000531042 PDHBP11177 359 aa18.58■□□□□ 0.56
CPSF1-205ENST00000531042 CDK7P50613 346 aa18.58■□□□□ 0.56
CPSF1-205ENST00000531042 NSMFQ6X4W1 530 aa18.58■□□□□ 0.56
CPSF1-205ENST00000531042 SLC17A8Q8NDX2 589 aa18.58■□□□□ 0.56
CPSF1-205ENST00000531042 RNF41Q9H4P4 317 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-205ENST00000531042 GNEQ9Y223 722 aaKnown RBP18.58■□□□□ 0.56
CPSF1-205ENST00000531042 DDX49Q9Y6V7 483 aaKnown RBP18.58■□□□□ 0.56
CPSF1-205ENST00000531042 LAMA4Q16363 1823 aa18.58■□□□□ 0.56
CPSF1-205ENST00000531042 MROH7Q68CQ1 1323 aa18.57■□□□□ 0.56
CPSF1-205ENST00000531042 ZNF213O14771 459 aa18.57■□□□□ 0.56
CPSF1-205ENST00000531042 CWC27Q6UX04 472 aaKnown RBP18.57■□□□□ 0.56
CPSF1-205ENST00000531042 VTI1AQ96AJ9 217 aa18.57■□□□□ 0.56
CPSF1-205ENST00000531042 PURBQ96QR8 312 aaKnown RBP18.57■□□□□ 0.56
CPSF1-205ENST00000531042 DIAPH3Q9NSV4 1193 aa18.57■□□□□ 0.56
CPSF1-205ENST00000531042 NEDD4P46934 1319 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 A0A0U1RQG5 324 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-205ENST00000531042 SNHG28P0DPA3 235 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 EPHB4P54760 987 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 BEX3Q00994 111 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 ZNF543Q08ER8 600 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 BAATQ14032 418 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-205ENST00000531042 TAPT1Q6NXT6 567 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 NOL8Q76FK4 1167 aaKnown RBP18.56■□□□□ 0.56
CPSF1-205ENST00000531042 MORC4Q8TE76 937 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 ESR2Q92731 530 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 PDGFCQ9NRA1 345 aa18.56■□□□□ 0.56
CPSF1-205ENST00000531042 ARVCFO00192 962 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 HIP1O00291 1037 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 NFIBO00712 420 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 TIMP1P01033 207 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 SMPD1P17405 629 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 FPGSQ05932 587 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 IQSEC1Q6DN90 963 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 EEPD1Q7L9B9 569 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 TLK2Q86UE8 772 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 FBXO16Q8IX29 292 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-205ENST00000531042 ZKSCAN3Q9BRR0 538 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
CPSF1-205ENST00000531042 NT5C2P49902 561 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
CPSF1-205ENST00000531042 ZNF697Q5TEC3 545 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 DGKHQ86XP1 1220 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 CLEC4DQ8WXI8 215 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 FAM161BQ96MY7 647 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 GUCD1Q96NT3 240 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 VTA1Q9NP79 307 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 ADD3Q9UEY8 706 aaKnown RBP18.54■□□□□ 0.56
CPSF1-205ENST00000531042 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
CPSF1-205ENST00000531042 LOC102724159A0A0B4J2E5 919 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 A0A0C4DFX4 3053 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 DYNC1LI2O43237 492 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-205ENST00000531042 PTGS1P23219 599 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 ALDH5A1P51649 535 aaPredicted RBP18.53■□□□□ 0.56
CPSF1-205ENST00000531042 PWP2Q15269 919 aaKnown RBP18.53■□□□□ 0.56
CPSF1-205ENST00000531042 FSCN1Q16658 493 aaKnown RBP18.53■□□□□ 0.56
CPSF1-205ENST00000531042 TMEM63BQ5T3F8 832 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 FAM126BQ8IXS8 530 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 RNPC3Q96LT9 517 aaKnown RBP18.53■□□□□ 0.56
CPSF1-205ENST00000531042 DSCC1Q9BVC3 393 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 AP5M1Q9H0R1 490 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 Q9Y3F1 56 aa18.53■□□□□ 0.56
CPSF1-205ENST00000531042 WDR19Q8NEZ3 1342 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 KDM4AO75164 1064 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 CABYRO75952 493 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 GOLGA8HP0CJ92 632 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 CCDC178Q5BJE1 867 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 GPATCH4Q5T3I0 446 aaKnown RBP18.52■□□□□ 0.56
CPSF1-205ENST00000531042 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 CXCL17Q6UXB2 119 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 SLC30A10Q6XR72 485 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 RNF207Q6ZRF8 634 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
CPSF1-205ENST00000531042 IQCA1Q86XH1 822 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms