RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 CDC37Q16543 378 aaPredicted RBP11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 WWC2Q6AWC2 1192 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 FAM160B2Q86V87 743 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 SHISA4Q96DD7 197 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 SLF1Q9BQI6 1058 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 KCNJ14Q9UNX9 436 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 MTMR6Q9Y217 621 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 ZDHHC9Q9Y397 364 aa11.52□□□□□ -0.56
RPUSD4-205ENST00000530903 COL11A1P12107 1806 aaPredicted RBP11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 WDR33Q9C0J8 1336 aaKnown RBP11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 PNMA6FA0A0J9YX94 578 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 LOC100996750A0A140TA64 210 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 BHMG1C9JSJ3 638 aaPredicted RBP11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 ZBTB5O15062 677 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 PLA2G6O60733 806 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 PPP1R11O60927 126 aaPredicted RBP11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 BRD1O95696 1058 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 FSTL1Q12841 308 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 SNAPC2Q13487 334 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 QRICH1Q2TAL8 776 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 KRT40Q6A162 431 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 FERMT3Q86UX7 667 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 MTMR8Q96EF0 704 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 KRTAP4-6Q9BYQ5 205 aa11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.57
RPUSD4-205ENST00000530903 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L15C9J2P7 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L13C9JLJ4 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L11C9JVI0 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L18D6R9N7 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L22D6RA61 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L17D6RBQ6 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L19D6RCP7 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L20D6RJB6 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 STXBP3O00186 592 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 ZSCAN22P10073 491 aaPredicted RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 TAL1P17542 331 aaPredicted RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 XBP1P17861 261 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 ZNF157P51786 506 aaPredicted RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 USP17L24Q0WX57 530 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 MOGSQ13724 837 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 MCTP1Q6DN14 999 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 TYW1BQ6NUM6 668 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 PROCA1Q8NCQ7 364 aaPredicted RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 COA7Q96BR5 231 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 BARHL2Q9NY43 387 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 TLL2Q9Y6L7 1015 aa11.51□□□□□ -0.57
RPUSD4-205ENST00000530903 SMCHD1A6NHR9 2005 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 F13A1P00488 732 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 MMP1P03956 469 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 GTF2A2P52657 109 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 NAPAP54920 295 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 NLRP5P59047 1200 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 FOXD4L6Q3SYB3 417 aaPredicted RBP11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 USH1GQ495M9 461 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 RGMBQ6NW40 437 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 FOXD4L3Q6VB84 417 aaPredicted RBP11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 FASTKD5Q7L8L6 764 aaKnown RBP11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 FBXO11Q86XK2 927 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 SH3GLB2Q9NR46 395 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 AGTPBP1Q9UPW5 1226 aa11.5□□□□□ -0.57
RPUSD4-205ENST00000530903 CCL15-CCL14A0A0B4J2E2 113 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 KIF28PB7ZC32 967 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 hCG_1984214I3L0E3 225 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 CETPP11597 493 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 COG2Q14746 738 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 CCL15Q16663 113 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 GPAT2Q6NUI2 795 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 ZNF713Q8N859 430 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 CCDC148Q8NFR7 591 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 BRI3BPQ8WY22 251 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 PHF20Q9BVI0 1012 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 AMNQ9BXJ7 453 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 PCDHA1Q9Y5I3 950 aa11.49□□□□□ -0.57
RPUSD4-205ENST00000530903 A0A0G2JMZ2 1700 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 VWA5AO00534 786 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 ADAMTS3O15072 1205 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 ZBED4O75132 1171 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 KIF23Q02241 960 aaPredicted RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 RESTQ13127 1097 aa11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 GNL2Q13823 731 aaKnown RBP11.48□□□□□ -0.57
RPUSD4-205ENST00000530903 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms