RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 IFT20Q8IY31 132 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 LRWD1Q9UFC0 647 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 MAPK8IP1Q9UQF2 711 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 PPFIA2O75334 1257 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 MOCS3O95396 460 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 DNA2P51530 1060 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 RIPK1Q13546 671 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 TSR1Q2NL82 804 aaKnown RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 GPIHBP1Q8IV16 184 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
PCF11-204ENST00000530660 LIMA1Q9UHB6 759 aaKnown RBP15.65■□□□□ 0.1
PCF11-204ENST00000530660 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 ZMYM1Q5SVZ6 1142 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 ARHGAP22Q7Z5H3 698 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 TAF1DQ9H5J8 278 aaPredicted RBP15.64■□□□□ 0.09
PCF11-204ENST00000530660 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 THRAP3Q9Y2W1 955 aaKnown RBP15.64■□□□□ 0.09
PCF11-204ENST00000530660 KCNJ18B7U540 433 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 GCOM1H8Y6P7 765 aaPredicted RBP15.64■□□□□ 0.09
PCF11-204ENST00000530660 MYZAPP0CAP1 466 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 PTPREP23469 700 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 TRIM14Q14142 442 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 KCNJ12Q14500 433 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 SLMAPQ14BN4 828 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 MDM1Q8TC05 714 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 CNKSR1Q969H4 720 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 VPS54Q9P1Q0 977 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 GGT7Q9UJ14 662 aa15.64■□□□□ 0.09
PCF11-204ENST00000530660 NEURL1BA8MQ27 555 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 BTBD18B2RXH4 712 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 H7C1W4 665 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 DDX58O95786 925 aaKnown RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 MYL6BP14649 208 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 DRD4P21917 467 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 ANTXR2P58335 489 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 KIF5AQ12840 1032 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 CCDC96Q2M329 555 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 TCP11X2Q5H9J9 407 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 TAX1BP1Q86VP1 789 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 CCHCR1Q8TD31 782 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 TEKT4Q8WW24 435 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 CASKIN2Q8WXE0 1202 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 RUBCNQ92622 972 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 DNAJC7Q99615 494 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 MYD88Q99836 296 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 CSRNP2Q9H175 543 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 NHEJ1Q9H9Q4 299 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 COPRSQ9NQ92 184 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 BIN2Q9UBW5 565 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 LRRC10BA6NIK2 292 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 SEMA3EO15041 775 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 RFX5P48382 616 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 CEBPAP49715 358 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 SCNN1BP51168 640 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 MXRA7P84157 204 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 ABTB2Q8N961 1025 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 EPSTI1Q96J88 318 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 NEUROD6Q96NK8 337 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 SENP2Q9HC62 589 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 MED1Q15648 1581 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 MRC1P22897 1456 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 TNFRSF8P28908 595 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 ALDH5A1P51649 535 aaPredicted RBP15.63■□□□□ 0.09
PCF11-204ENST00000530660 ITIH3Q06033 890 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 GCKRQ14397 625 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 GALNT15Q8N3T1 639 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 FAM81AQ8TBF8 368 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 GDF3Q9NR23 364 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 SLC12A4Q9UP95 1085 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 C2CD2Q9Y426 696 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 PCDHB6Q9Y5E3 794 aa15.63■□□□□ 0.09
PCF11-204ENST00000530660 LIN7AO14910 233 aaPredicted RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 ZNF263O14978 683 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 ZNF268Q14587 947 aaPredicted RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 TAF11Q15544 211 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 MTHFD1LQ6UB35 978 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 ZNF572Q7Z3I7 529 aaPredicted RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 CADPS2Q86UW7 1296 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 PROSER2Q86WR7 435 aaPredicted RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 PURBQ96QR8 312 aaKnown RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 TMEM165Q9HC07 324 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 HELLSQ9NRZ9 838 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 PAG1Q9NWQ8 432 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 MYH7P12883 1935 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 MAST3O60307 1309 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 UBN2Q6ZU65 1347 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 RNASE9P60153 205 aaKnown RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 NUGGCQ68CJ6 796 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 P3H4Q92791 437 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 GORASP1Q9BQQ3 440 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
PCF11-204ENST00000530660 NOVA2Q9UNW9 492 aaKnown RBP15.62■□□□□ 0.09
PCF11-204ENST00000530660 SH2B2O14492 632 aaPredicted RBP15.61■□□□□ 0.09
PCF11-204ENST00000530660 CLSTN1O94985 981 aa15.61■□□□□ 0.09
PCF11-204ENST00000530660 PLEKP08567 350 aaPredicted RBP15.61■□□□□ 0.09
PCF11-204ENST00000530660 PAFAH1B1P43034 410 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms