RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 PSRC1Q6PGN9 363 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-219ENST00000530495 CXCL17Q6UXB2 119 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 SEZ6LQ9BYH1 1024 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 PBX4Q9BYU1 374 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 PPP1R12CQ9BZL4 782 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 IL23AQ9NPF7 189 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 PRR12Q9ULL5 1215 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 ISY1Q9ULR0 285 aaKnown RBP17.7■□□□□ 0.42
CAPN1-219ENST00000530495 STX8Q9UNK0 236 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
CAPN1-219ENST00000530495 Q9Y3F1 56 aa17.7■□□□□ 0.42
CAPN1-219ENST00000530495 TSPY2A6NKD2 308 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 FOXP2O15409 715 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 SMPD1P17405 629 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 CYP2C18P33260 490 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 NOVP48745 357 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 ITGA7Q13683 1181 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 FSCN1Q16658 493 aaKnown RBP17.69■□□□□ 0.42
CAPN1-219ENST00000530495 MUM1L1Q5H9M0 696 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 TAPT1Q6NXT6 567 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 KCTD1Q719H9 257 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 HERVK_113Q902F9 699 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 AP5M1Q9H0R1 490 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 INCENPQ9NQS7 918 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 GRIN2DO15399 1336 aa17.69■□□□□ 0.42
CAPN1-219ENST00000530495 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-219ENST00000530495 ZEB2O60315 1214 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 NMT2O60551 498 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 SNAP25P60880 206 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 CTDSPL2Q05D32 466 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 USP38Q8NB14 1042 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 OTUD7AQ8TE49 926 aaPredicted RBP17.68■□□□□ 0.42
CAPN1-219ENST00000530495 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 PDGFCQ9NRA1 345 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 ANAPC4Q9UJX5 808 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
CAPN1-219ENST00000530495 LRRC37A2A6NM11 1700 aa17.67■□□□□ 0.42
CAPN1-219ENST00000530495 FGBP02675 491 aa17.67■□□□□ 0.42
CAPN1-219ENST00000530495 MX1P20591 662 aa17.67■□□□□ 0.42
CAPN1-219ENST00000530495 GAS2L1Q99501 681 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-219ENST00000530495 HIPK3Q9H422 1215 aa17.67■□□□□ 0.42
CAPN1-219ENST00000530495 DDX49Q9Y6V7 483 aaKnown RBP17.67■□□□□ 0.42
CAPN1-219ENST00000530495 VCANP13611 3396 aa17.67■□□□□ 0.42
CAPN1-219ENST00000530495 ICAM1P05362 532 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 FGRP09769 529 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 PTGS1P23219 599 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 TJAP1Q5JTD0 557 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 AKNAD1Q5T1N1 836 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 EEPD1Q7L9B9 569 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 TRPV6Q9H1D0 765 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 VTA1Q9NP79 307 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 PRDM6Q9NQX0 595 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
CAPN1-219ENST00000530495 MSRAQ9UJ68 235 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 LCTP09848 1927 aa17.66■□□□□ 0.42
CAPN1-219ENST00000530495 ORC4O43929 436 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 ALX1Q15699 326 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 RAB30Q15771 203 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 RASGRP2Q7LDG7 609 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 FBXO16Q8IX29 292 aaPredicted RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 DCAF4Q8WV16 495 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 NOC4LQ9BVI4 516 aaKnown RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
CAPN1-219ENST00000530495 PRDM12Q9H4Q4 367 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 UMODL1Q5DID0 1318 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 GBF1Q92538 1859 aa17.65■□□□□ 0.42
CAPN1-219ENST00000530495 CHD9Q3L8U1 2897 aa17.64■□□□□ 0.41
CAPN1-219ENST00000530495 LOC102724159A0A0B4J2E5 919 aa17.64■□□□□ 0.41
CAPN1-219ENST00000530495 B4GALT4O60513 344 aa17.64■□□□□ 0.41
CAPN1-219ENST00000530495 PWP2Q15269 919 aaKnown RBP17.64■□□□□ 0.41
CAPN1-219ENST00000530495 NSMFQ6X4W1 530 aa17.64■□□□□ 0.41
CAPN1-219ENST00000530495 ADD3Q9UEY8 706 aaKnown RBP17.64■□□□□ 0.41
CAPN1-219ENST00000530495 SALL3Q9BXA9 1300 aa17.64■□□□□ 0.41
CAPN1-219ENST00000530495 CCL23P55773 120 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 PSMC6P62333 389 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
CAPN1-219ENST00000530495 DUSP28Q4G0W2 176 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 VPS53Q5VIR6 699 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 TTBK2Q6IQ55 1244 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 OTOP2Q7RTS6 562 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 RPUSD2Q8IZ73 545 aaKnown RBP17.63■□□□□ 0.41
CAPN1-219ENST00000530495 ATXN2LQ8WWM7 1075 aaKnown RBP17.63■□□□□ 0.41
CAPN1-219ENST00000530495 EVI5LQ96CN4 794 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 WNT8AQ9H1J5 351 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 MTMR7Q9Y216 660 aa17.63■□□□□ 0.41
CAPN1-219ENST00000530495 SLC16A2P36021 539 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 ALDH5A1P51649 535 aaPredicted RBP17.62■□□□□ 0.41
CAPN1-219ENST00000530495 ADGRE1Q14246 886 aa17.62■□□□□ 0.41
CAPN1-219ENST00000530495 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms