RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CDK7P50613 346 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 PDE1AP54750 535 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 RRP12Q5JTH9 1297 aaKnown RBP24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 TTBK2Q6IQ55 1244 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 EEPD1Q7L9B9 569 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 ANAPC4Q9UJX5 808 aa24.54■■□□□ 1.52
TSPAN4-219ENST00000530404 A0A0U1RQG5 324 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 ARVCFO00192 962 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 PLA2G6O60733 806 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 SLC16A2P36021 539 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 TNFAIP2Q03169 654 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 TKFCQ3LXA3 575 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 PPP4R3BQ5MIZ7 849 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 PPP1R12CQ9BZL4 782 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 PDGFCQ9NRA1 345 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 CCPG1Q9ULG6 757 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 MROH7Q68CQ1 1323 aa24.53■■□□□ 1.52
TSPAN4-219ENST00000530404 TMEM63BQ5T3F8 832 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 NSMFQ6X4W1 530 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 FBXO16Q8IX29 292 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 HELLSQ9NRZ9 838 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 CYP39A1Q9NYL5 469 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 FRMPD2Q68DX3 1309 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 SCN5AQ14524 2016 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 CHD9Q3L8U1 2897 aa24.52■■□□□ 1.52
TSPAN4-219ENST00000530404 ASB14A6NK59 587 aa24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 ORC4O43929 436 aa24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 FGAP02671 866 aa24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 TLK2Q86UE8 772 aa24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 ZNF589Q86UQ0 364 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 FAM126BQ8IXS8 530 aa24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 MAFAQ8NHW3 353 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 COL25A1Q9BXS0 654 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 GNEQ9Y223 722 aaKnown RBP24.51■■□□□ 1.51
TSPAN4-219ENST00000530404 SMPD1P17405 629 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 NOVP48745 357 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 HAND2P61296 217 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 ALX1Q15699 326 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 MFSD5Q6N075 450 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 CXCL17Q6UXB2 119 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 DCAF4Q8WV16 495 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 GPCPD1Q9NPB8 672 aa24.5■■□□□ 1.51
TSPAN4-219ENST00000530404 DYNC1LI2O43237 492 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 ACRP10323 421 aa24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 CSF2RAP15509 400 aa24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 NMIQ13287 307 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 MCMDC2Q4G0Z9 681 aa24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 C16orf59Q7L2K0 433 aa24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 TMEM47Q9BQJ4 181 aa24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 RANBP17Q9H2T7 1088 aaKnown RBP24.49■■□□□ 1.51
TSPAN4-219ENST00000530404 ICAM1P05362 532 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 FGRP09769 529 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 HSPD1P10809 573 aaKnown RBP24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 FOSL2P15408 326 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 SYDE2Q5VT97 1194 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 TAPT1Q6NXT6 567 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 LNPKQ9C0E8 428 aa24.48■■□□□ 1.51
TSPAN4-219ENST00000530404 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 TRIM6-TRIM34B2RNG4 842 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 TLR3O15455 904 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 DNAJB2P25686 324 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 CYP2C18P33260 490 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 NKX3-2P78367 333 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 PPIGQ13427 754 aaKnown RBP eCLIP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 HDAC1Q13547 482 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 FSCN1Q16658 493 aaKnown RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 TMEM240Q5SV17 173 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 AP5M1Q9H0R1 490 aa24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 TRIP12Q14669 1992 aaPredicted RBP24.47■■□□□ 1.51
TSPAN4-219ENST00000530404 SPTBN5Q9NRC6 3674 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 UMODL1Q5DID0 1318 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 KIAA1217Q5T5P2 1943 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 GRXCR1A8MXD5 290 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 NFIBO00712 420 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 CD4P01730 458 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 TOP1P11387 765 aaKnown RBP24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 BAATQ14032 418 aaPredicted RBP24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 RILPL2Q969X0 211 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 REV3LO60673 3130 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 CHD7Q9P2D1 2997 aa24.46■■□□□ 1.51
TSPAN4-219ENST00000530404 MYH7BA7E2Y1 1941 aa24.45■■□□□ 1.51
TSPAN4-219ENST00000530404 GRIN2DO15399 1336 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 PSMC6P62333 389 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 ITGA7Q13683 1181 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 GRIN2CQ14957 1233 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 BTNL9Q6UXG8 535 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 KIAA1211Q6ZU35 1233 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 TMEM199Q8N511 208 aa24.45■■□□□ 1.5
TSPAN4-219ENST00000530404 CCDC171Q6TFL3 1326 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 PTPDC1A2A3K4 754 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 PBX2P40425 430 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 ALDH5A1P51649 535 aaPredicted RBP24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 IQSEC1Q6DN90 963 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 B4GALNT3Q6L9W6 998 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 SLC30A10Q6XR72 485 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 ZNF365Q70YC5 407 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 TBC1D10CQ8IV04 446 aa24.44■■□□□ 1.5
TSPAN4-219ENST00000530404 SCN10AQ9Y5Y9 1956 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms