RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 KCTD16Q68DU8 428 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 C8orf74Q6P047 294 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 MRPL44Q9H9J2 332 aaKnown RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 BCS1LQ9Y276 419 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 ATP1A2P50993 1020 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 UHMK1Q8TAS1 419 aaKnown RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 CEP95Q96GE4 821 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 H7C1D1 291 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 CETN3O15182 167 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 PNMA6AP0CW24 399 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 FXR1P51114 621 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 TNIP1Q15025 636 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 MYCT1Q8N699 235 aa13.73□□□□□ -0.21
SCN3B-206ENST00000530277 GPR161Q8N6U8 529 aaKnown RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 NAA15Q9BXJ9 866 aaKnown RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 OSBPL5Q9H0X9 879 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-206ENST00000530277 CLIC2O15247 247 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-206ENST00000530277 TOB1P50616 345 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-206ENST00000530277 HS2ST1Q7LGA3 356 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
SCN3B-206ENST00000530277 CDHR2Q9BYE9 1310 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 TUBB4AP04350 444 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 CDC23Q9UJX2 597 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 EHHADHQ08426 723 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
SCN3B-206ENST00000530277 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
SCN3B-206ENST00000530277 DISC1Q9NRI5 854 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
SCN3B-206ENST00000530277 LONP1P36776 959 aaKnown RBP13.71□□□□□ -0.21
SCN3B-206ENST00000530277 DNM2P50570 870 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 VAV2P52735 878 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 C2orf54Q08AI8 447 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 NSMFQ6X4W1 530 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 NBPF11Q86T75 865 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 SUGCTQ9HAC7 445 aa13.71□□□□□ -0.21
SCN3B-206ENST00000530277 TTC26A0AVF1 554 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 MFAP3LO75121 409 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 TDP2O95551 362 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 FTCDO95954 541 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 MCM3P25205 808 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 SLC9C1Q4G0N8 1177 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 FAM26FQ5R3K3 315 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 MYOCDQ8IZQ8 938 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.22
SCN3B-206ENST00000530277 XDHP47989 1333 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 MOCS3O95396 460 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 ZSCAN20P17040 1043 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 ZNF658Q5TYW1 1059 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 SRGAP1Q7Z6B7 1085 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 POTEDQ86YR6 584 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 UBLCP1Q8WVY7 318 aaPredicted RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 TEKT1Q969V4 418 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 MRRFQ96E11 262 aaKnown RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 PANK4Q9NVE7 773 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 FAN1Q9Y2M0 1017 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 NDUFA10O95299 355 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 APBA3O96018 575 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 PTPAQ15257 358 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 CFAP58Q5T655 872 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 MICALL1Q8N3F8 863 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 SH2D3AQ9BRG2 576 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 DNM3Q9UQ16 869 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 SLFN13Q68D06 897 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 TTBK2Q6IQ55 1244 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 PTF1AQ7RTS3 328 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 P2RX5Q93086 422 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
SCN3B-206ENST00000530277 DDX41Q9UJV9 622 aaKnown RBP13.7□□□□□ -0.22
SCN3B-206ENST00000530277 ABCC12Q96J65 1359 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 CETN1Q12798 172 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-206ENST00000530277 RAD9BQ6WBX8 426 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 MIGA2Q7L4E1 593 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 LINC00116Q8NCU8 138 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 ABCB6Q9NP58 842 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-206ENST00000530277 SLURP2P0DP57 97 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
SCN3B-206ENST00000530277 ADAM9Q13443 819 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 TRIM14Q14142 442 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 ZSCAN26Q16670 478 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 PFKFB3Q16875 520 aaPredicted RBP13.69□□□□□ -0.22
SCN3B-206ENST00000530277 KCNK3O14649 394 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 KLK7P49862 253 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 ICA1Q05084 483 aa13.69□□□□□ -0.22
SCN3B-206ENST00000530277 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms