RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 GRIN2CQ14957 1233 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 GNASQ5JWF2 1037 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 TMEM240Q5SV17 173 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 MFSD5Q6N075 450 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 VWCEQ96DN2 955 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 CTDP1Q9Y5B0 961 aaPredicted RBP24.28■■□□□ 1.48
SF3B2-207ENST00000529577 UMODL1Q5DID0 1318 aa24.28■■□□□ 1.48
SF3B2-207ENST00000529577 CHD7Q9P2D1 2997 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 TSPY2A6NKD2 308 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 CSF2RAP15509 400 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 SLC16A2P36021 539 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 PDE1AP54750 535 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 ANKRD45Q5TZF3 282 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 CXCL17Q6UXB2 119 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 ZNF589Q86UQ0 364 aaPredicted RBP24.27■■□□□ 1.48
SF3B2-207ENST00000529577 MAFAQ8NHW3 353 aaPredicted RBP24.27■■□□□ 1.48
SF3B2-207ENST00000529577 CHURC1Q8WUH1 139 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 GLT1D1Q96MS3 346 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 MTMR7Q9Y216 660 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 REV3LO60673 3130 aa24.27■■□□□ 1.48
SF3B2-207ENST00000529577 ORC4O43929 436 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 FDX1P10109 184 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 ACRP10323 421 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 PBX2P40425 430 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 TNFAIP2Q03169 654 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 ALX1Q15699 326 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 LRRFIP1Q32MZ4 808 aaKnown RBP24.26■■□□□ 1.47
SF3B2-207ENST00000529577 USP38Q8NB14 1042 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 PCSK9Q8NBP7 692 aaKnown RBP24.26■■□□□ 1.47
SF3B2-207ENST00000529577 RANBP17Q9H2T7 1088 aaKnown RBP24.26■■□□□ 1.47
SF3B2-207ENST00000529577 MUC3AQ02505 3323 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 GBF1Q92538 1859 aa24.26■■□□□ 1.47
SF3B2-207ENST00000529577 A0A0U1RQG5 324 aaPredicted RBP24.25■■□□□ 1.47
SF3B2-207ENST00000529577 FGAP02671 866 aa24.25■■□□□ 1.47
SF3B2-207ENST00000529577 EEPD1Q7L9B9 569 aa24.25■■□□□ 1.47
SF3B2-207ENST00000529577 FBXO16Q8IX29 292 aaPredicted RBP24.25■■□□□ 1.47
SF3B2-207ENST00000529577 MORC4Q8TE76 937 aa24.25■■□□□ 1.47
SF3B2-207ENST00000529577 PPP1R12CQ9BZL4 782 aa24.25■■□□□ 1.47
SF3B2-207ENST00000529577 ISY1Q9ULR0 285 aaKnown RBP24.25■■□□□ 1.47
SF3B2-207ENST00000529577 RANBP6O60518 1105 aaKnown RBP24.24■■□□□ 1.47
SF3B2-207ENST00000529577 SLC3A2P08195 630 aaKnown RBP24.24■■□□□ 1.47
SF3B2-207ENST00000529577 DNAJB2P25686 324 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 CYP2C18P33260 490 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 TKFCQ3LXA3 575 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 BTNL9Q6UXG8 535 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 EVI5LQ96CN4 794 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 TMEM47Q9BQJ4 181 aa24.24■■□□□ 1.47
SF3B2-207ENST00000529577 NFIBO00712 420 aa24.23■■□□□ 1.47
SF3B2-207ENST00000529577 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
SF3B2-207ENST00000529577 TLK2Q86UE8 772 aa24.23■■□□□ 1.47
SF3B2-207ENST00000529577 HELLSQ9NRZ9 838 aa24.23■■□□□ 1.47
SF3B2-207ENST00000529577 CXXC1Q9P0U4 656 aaPredicted RBP24.23■■□□□ 1.47
SF3B2-207ENST00000529577 FRMPD2Q68DX3 1309 aaPredicted RBP24.23■■□□□ 1.47
SF3B2-207ENST00000529577 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.22■■□□□ 1.47
SF3B2-207ENST00000529577 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.22■■□□□ 1.47
SF3B2-207ENST00000529577 RBAK-RBAKDNI3L0D1 243 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 ICAM1P05362 532 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 PSMC6P62333 389 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 NMIQ13287 307 aaPredicted RBP24.22■■□□□ 1.47
SF3B2-207ENST00000529577 ZNF365Q70YC5 407 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 CLEC4DQ8WXI8 215 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 CCPG1Q9ULG6 757 aa24.22■■□□□ 1.47
SF3B2-207ENST00000529577 ASB14A6NK59 587 aa24.21■■□□□ 1.47
SF3B2-207ENST00000529577 DYNC1LI2O43237 492 aaPredicted RBP24.21■■□□□ 1.47
SF3B2-207ENST00000529577 HSPD1P10809 573 aaKnown RBP24.21■■□□□ 1.47
SF3B2-207ENST00000529577 HDAC1Q13547 482 aaPredicted RBP24.21■■□□□ 1.47
SF3B2-207ENST00000529577 BAATQ14032 418 aaPredicted RBP24.21■■□□□ 1.47
SF3B2-207ENST00000529577 TBC1D10CQ8IV04 446 aa24.21■■□□□ 1.47
SF3B2-207ENST00000529577 VTI1AQ96AJ9 217 aa24.21■■□□□ 1.47
SF3B2-207ENST00000529577 PBX4Q9BYU1 374 aa24.21■■□□□ 1.47
SF3B2-207ENST00000529577 TRPV6Q9H1D0 765 aa24.21■■□□□ 1.47
SF3B2-207ENST00000529577 MROH7Q68CQ1 1323 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 TMEM265A0A087WTH1 108 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 FOSL2P15408 326 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 HAND2P61296 217 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 FSCN1Q16658 493 aaKnown RBP24.2■■□□□ 1.46
SF3B2-207ENST00000529577 NSMFQ6X4W1 530 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 SLC30A10Q6XR72 485 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 DCAF4Q8WV16 495 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 WNT8AQ9H1J5 351 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 GPCPD1Q9NPB8 672 aa24.2■■□□□ 1.46
SF3B2-207ENST00000529577 PDHBP11177 359 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 ITGA7Q13683 1181 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 CCDC96Q2M329 555 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 SYDE2Q5VT97 1194 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 SPC25Q9HBM1 224 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 PRDM6Q9NQX0 595 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 TCP11L1Q9NUJ3 509 aa24.19■■□□□ 1.46
SF3B2-207ENST00000529577 B4GALT4O60513 344 aa24.18■■□□□ 1.46
SF3B2-207ENST00000529577 ALDH5A1P51649 535 aaPredicted RBP24.18■■□□□ 1.46
SF3B2-207ENST00000529577 PPIGQ13427 754 aaKnown RBP eCLIP24.18■■□□□ 1.46
SF3B2-207ENST00000529577 MCMDC2Q4G0Z9 681 aa24.18■■□□□ 1.46
SF3B2-207ENST00000529577 RRP12Q5JTH9 1297 aaKnown RBP24.18■■□□□ 1.46
SF3B2-207ENST00000529577 PPP1R13LQ8WUF5 828 aa24.18■■□□□ 1.46
SF3B2-207ENST00000529577 CPVLQ9H3G5 476 aa24.18■■□□□ 1.46
SF3B2-207ENST00000529577 ZNF576Q9H609 170 aa24.18■■□□□ 1.46
SF3B2-207ENST00000529577 SNHG28P0DPA3 235 aa24.17■■□□□ 1.46
SF3B2-207ENST00000529577 TOP1P11387 765 aaKnown RBP24.17■■□□□ 1.46
SF3B2-207ENST00000529577 IQSEC1Q6DN90 963 aa24.17■■□□□ 1.46
SF3B2-207ENST00000529577 NOL8Q76FK4 1167 aaKnown RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms