RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 PCSK9Q8NBP7 692 aaKnown RBP19.04■□□□□ 0.64
TRIM3-209ENST00000529529 RANBP17Q9H2T7 1088 aaKnown RBP19.04■□□□□ 0.64
TRIM3-209ENST00000529529 CYP39A1Q9NYL5 469 aa19.04■□□□□ 0.64
TRIM3-209ENST00000529529 DCDC2CA8MYV0 355 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 HIP1O00291 1037 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 ASGR1P07306 291 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 ITGB8P26012 769 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 TNFAIP2Q03169 654 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 GNASQ5JWF2 1037 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 NOL8Q76FK4 1167 aaKnown RBP19.03■□□□□ 0.64
TRIM3-209ENST00000529529 ESR2Q92731 530 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 GLT1D1Q96MS3 346 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 ZKSCAN3Q9BRR0 538 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 TMEM39AQ9NV64 488 aa19.03■□□□□ 0.64
TRIM3-209ENST00000529529 DDX49Q9Y6V7 483 aaKnown RBP19.03■□□□□ 0.64
TRIM3-209ENST00000529529 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.02■□□□□ 0.64
TRIM3-209ENST00000529529 KIAA0355O15063 1070 aa19.02■□□□□ 0.64
TRIM3-209ENST00000529529 PDHBP11177 359 aa19.02■□□□□ 0.64
TRIM3-209ENST00000529529 RAG1P15918 1043 aa19.02■□□□□ 0.64
TRIM3-209ENST00000529529 CST5P28325 142 aaPredicted RBP19.02■□□□□ 0.64
TRIM3-209ENST00000529529 C9orf50Q5SZB4 431 aa19.02■□□□□ 0.64
TRIM3-209ENST00000529529 TOX2Q96NM4 488 aa19.02■□□□□ 0.64
TRIM3-209ENST00000529529 PURBQ96QR8 312 aaKnown RBP19.02■□□□□ 0.64
TRIM3-209ENST00000529529 UPF3AQ9H1J1 476 aaKnown RBP19.02■□□□□ 0.64
TRIM3-209ENST00000529529 FAAP100Q0VG06 881 aa19.01■□□□□ 0.63
TRIM3-209ENST00000529529 BAATQ14032 418 aaPredicted RBP19.01■□□□□ 0.63
TRIM3-209ENST00000529529 EEPD1Q7L9B9 569 aa19.01■□□□□ 0.63
TRIM3-209ENST00000529529 ANKRD33Q7Z3H0 272 aa19.01■□□□□ 0.63
TRIM3-209ENST00000529529 ASTN1O14525 1302 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 ELP1O95163 1332 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 NEDD4P46934 1319 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 LAMA3Q16787 3333 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 CTAGE5O15320 804 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 BEX3Q00994 111 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 ZNF543Q08ER8 600 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 DGKHQ86XP1 1220 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 PDGFCQ9NRA1 345 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 MTMR10Q9NXD2 777 aa19■□□□□ 0.63
TRIM3-209ENST00000529529 NFIBO00712 420 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 DYNC1LI2O43237 492 aaPredicted RBP18.99■□□□□ 0.63
TRIM3-209ENST00000529529 KDM4AO75164 1064 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 GOLGA8HP0CJ92 632 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 SNHG28P0DPA3 235 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 SMPD1P17405 629 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 CDK7P50613 346 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 CCDC178Q5BJE1 867 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 IQSEC1Q6DN90 963 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 TAPT1Q6NXT6 567 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 AP5M1Q9H0R1 490 aa18.99■□□□□ 0.63
TRIM3-209ENST00000529529 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
TRIM3-209ENST00000529529 PTPDC1A2A3K4 754 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 NKX3-2P78367 333 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 IMMTQ16891 758 aaKnown RBP18.98■□□□□ 0.63
TRIM3-209ENST00000529529 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 IQCA1Q86XH1 822 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 SLC17A8Q8NDX2 589 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 CLEC4DQ8WXI8 215 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 DSCC1Q9BVC3 393 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 CTNNA3Q9UI47 895 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 PNMA2Q9UL42 364 aa18.98■□□□□ 0.63
TRIM3-209ENST00000529529 GNEQ9Y223 722 aaKnown RBP18.98■□□□□ 0.63
TRIM3-209ENST00000529529 A0A0U1RQG5 324 aaPredicted RBP18.97■□□□□ 0.63
TRIM3-209ENST00000529529 B4E1Z4 1266 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 ARVCFO00192 962 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 PTGS1P23219 599 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 CALML3P27482 149 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 PDE4AP27815 886 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 NT5C2P49902 561 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 EPHB4P54760 987 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 FPGSQ05932 587 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 TMEM63BQ5T3F8 832 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 GPATCH4Q5T3I0 446 aaKnown RBP18.97■□□□□ 0.63
TRIM3-209ENST00000529529 FAM109BQ6ICB4 259 aaPredicted RBP18.97■□□□□ 0.63
TRIM3-209ENST00000529529 CXCL17Q6UXB2 119 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 RNF207Q6ZRF8 634 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 TLK2Q86UE8 772 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 FBXO16Q8IX29 292 aaPredicted RBP18.97■□□□□ 0.63
TRIM3-209ENST00000529529 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 ANKS1AQ92625 1134 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 ZSCAN10Q96SZ4 725 aaPredicted RBP18.97■□□□□ 0.63
TRIM3-209ENST00000529529 UBA5Q9GZZ9 404 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 VTA1Q9NP79 307 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 ZSWIM5Q9P217 1185 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 MROH7Q68CQ1 1323 aa18.97■□□□□ 0.63
TRIM3-209ENST00000529529 TIMP1P01033 207 aa18.96■□□□□ 0.63
TRIM3-209ENST00000529529 ALDH5A1P51649 535 aaPredicted RBP18.96■□□□□ 0.63
TRIM3-209ENST00000529529 FSCN1Q16658 493 aaKnown RBP18.96■□□□□ 0.63
TRIM3-209ENST00000529529 PNMA1Q8ND90 353 aa18.96■□□□□ 0.63
TRIM3-209ENST00000529529 FAM161BQ96MY7 647 aa18.96■□□□□ 0.63
TRIM3-209ENST00000529529 KAT14Q9H8E8 782 aa18.96■□□□□ 0.63
TRIM3-209ENST00000529529 STXBP5LQ9Y2K9 1186 aa18.96■□□□□ 0.63
TRIM3-209ENST00000529529 IRX6P78412 446 aaPredicted RBP18.95■□□□□ 0.62
TRIM3-209ENST00000529529 SLC30A10Q6XR72 485 aa18.95■□□□□ 0.62
TRIM3-209ENST00000529529 KRT23Q9C075 422 aa18.95■□□□□ 0.62
TRIM3-209ENST00000529529 TBX21Q9UL17 535 aa18.95■□□□□ 0.62
TRIM3-209ENST00000529529 Q9Y3F1 56 aa18.95■□□□□ 0.62
TRIM3-209ENST00000529529 LTBP2Q14767 1821 aa18.95■□□□□ 0.62
TRIM3-209ENST00000529529 TLR3O15455 904 aaKnown RBP18.94■□□□□ 0.62
TRIM3-209ENST00000529529 ZEB2O60315 1214 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms