RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 FEM1BQ9UK73 627 aa7.39□□□□□ -1.23
CHRNA6-202ENST00000529467 GBF1Q92538 1859 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 ASTN1O14525 1302 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 OAZ1P54368 228 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 CNTN2Q02246 1040 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 CCDC144CPQ8IYA2 1237 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 ZNF444Q8N0Y2 327 aaPredicted RBP7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 FAM133AQ8N9E0 248 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 KBTBD3Q8NAB2 608 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 HERVK_113Q902F9 699 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 APPBP2Q92624 585 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 CEP95Q96GE4 821 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 PPP1R12CQ9BZL4 782 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 LRRCC1Q9C099 1032 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 SPC25Q9HBM1 224 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 EPB41L4AQ9HCS5 686 aaPredicted RBP7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 IL23AQ9NPF7 189 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 ECHDC1Q9NTX5 307 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 MTMR4Q9NYA4 1195 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 FBXO40Q9UH90 709 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 SYNPO2Q9UMS6 1093 aa7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
CHRNA6-202ENST00000529467 VCANP13611 3396 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CDH23Q9H251 3354 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 ZNF536O15090 1300 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 GRIN2DO15399 1336 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 SOWAHBA6NEL2 793 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 PATL2C9JE40 543 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 TNFRSF10AO00220 468 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 TLR3O15455 904 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 RNF113AO15541 343 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 EIF5BO60841 1220 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 PRDM1O75626 825 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 TTLL1O95922 423 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 FGBP02675 491 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 FDX1P10109 184 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 BMP3P12645 472 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CYP2C18P33260 490 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 BEX3Q00994 111 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 TNFAIP2Q03169 654 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 ADGRE1Q14246 886 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 AKNAD1Q5T1N1 836 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 SLFN13Q68D06 897 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 PSRC1Q6PGN9 363 aaPredicted RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CCDC174Q6PII3 467 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CCDC129Q6ZRS4 1044 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 IFNL3Q8IZI9 196 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 GMCL1P1Q8NEA9 526 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 ATXN2LQ8WWM7 1075 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 PPM1EQ8WY54 764 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 GAS2L1Q99501 681 aaPredicted RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 PRDM12Q9H4Q4 367 aa7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 CTDP1Q9Y5B0 961 aaPredicted RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 TCF20Q9UGU0 1960 aaKnown RBP7.37□□□□□ -1.23
CHRNA6-202ENST00000529467 SPTBN5Q9NRC6 3674 aaKnown RBP7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 UMODL1Q5DID0 1318 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ASB14A6NK59 587 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 TMEM232C9JQI7 657 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 M0R2C6 588 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 GPAA1O43292 621 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ST18O60284 1047 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 PLA2G6O60733 806 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 CABYRO75952 493 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ZFYP08048 801 aaPredicted RBP7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 SMPD1P17405 629 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 GNAT2P19087 354 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ITGA7Q13683 1181 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 TMEM63BQ5T3F8 832 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 TAPT1Q6NXT6 567 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 CXCL17Q6UXB2 119 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 SMC5Q8IY18 1101 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 LRRC47Q8N1G4 583 aaKnown RBP7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 CHURC1Q8WUH1 139 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 STAG1Q8WVM7 1258 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 VWCEQ96DN2 955 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 AGBL1Q96MI9 1066 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ASB2Q96Q27 587 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 DCTPP1Q9H773 170 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ACAD9Q9H845 621 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 A1CFQ9NQ94 594 aaKnown RBP7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 PDGFCQ9NRA1 345 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 HOMER2Q9NSB8 354 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 MSRAQ9UJ68 235 aa7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 YBX2Q9Y2T7 364 aaKnown RBP7.36□□□□□ -1.23
CHRNA6-202ENST00000529467 TTC28Q96AY4 2481 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 B4GALT4O60513 344 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 APPP05067 770 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TSPY3P0CV98 308 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TSPY8P0CW00 308 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 COL9A1P20849 921 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 PTGS1P23219 599 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 MCCP23508 829 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 TDO2P48775 406 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 CCL23P55773 120 aa7.35□□□□□ -1.23
CHRNA6-202ENST00000529467 MRPS5P82675 430 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms