RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 NOTOA8MTQ0 251 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 FADS2P1A8MWK0 482 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 FAM153BP0C7A2 387 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 ENDOUP21128 410 aaKnown RBP7.15□□□□□ -1.26
CD44-230ENST00000528922 HOXC12P31275 282 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 HSP90AA2PQ14568 343 aaPredicted RBP7.15□□□□□ -1.26
CD44-230ENST00000528922 YOD1Q5VVQ6 348 aaPredicted RBP7.15□□□□□ -1.26
CD44-230ENST00000528922 LRRC47Q8N1G4 583 aaKnown RBP7.15□□□□□ -1.26
CD44-230ENST00000528922 SYTL4Q96C24 671 aaPredicted RBP7.15□□□□□ -1.26
CD44-230ENST00000528922 CCDC120Q96HB5 630 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 MRFAP1L1Q96HT8 127 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 PTCHD1Q96NR3 888 aa7.15□□□□□ -1.26
CD44-230ENST00000528922 ARNTLO00327 626 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 USP2O75604 605 aaPredicted RBP7.14□□□□□ -1.27
CD44-230ENST00000528922 EFEMP2O95967 443 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 HPXP02790 462 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 SCG5P05408 212 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 THBDP07204 575 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 TRHRP34981 398 aaPredicted RBP7.14□□□□□ -1.27
CD44-230ENST00000528922 GFRA1P56159 465 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 DUSP4Q13115 394 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 PRSS53Q2L4Q9 553 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 FOXB2Q5VYV0 432 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 EEF1DP3Q658K8 133 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 ZBTB38Q8NAP3 1195 aaPredicted RBP7.14□□□□□ -1.27
CD44-230ENST00000528922 PDZD8Q8NEN9 1154 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 AARSD1Q9BTE6 412 aaKnown RBP7.14□□□□□ -1.27
CD44-230ENST00000528922 C19orf44Q9H6X5 657 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 TNFRSF10DQ9UBN6 386 aa7.14□□□□□ -1.27
CD44-230ENST00000528922 LOC105371045A0A1W2PR82 267 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 SNRPB2P08579 225 aaKnown RBP7.13□□□□□ -1.27
CD44-230ENST00000528922 ECI1P42126 302 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 KIR2DL1P43626 348 aaPredicted RBP7.13□□□□□ -1.27
CD44-230ENST00000528922 KIR2DL2P43627 348 aaPredicted RBP7.13□□□□□ -1.27
CD44-230ENST00000528922 SEPHS1P49903 392 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 TIGD5Q53EQ6 642 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 FYB2Q5VWT5 728 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 DENND5AQ6IQ26 1287 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 NAT16Q8N8M0 369 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 ANKS4BQ8N8V4 417 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 JMYQ8N9B5 988 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 TMEM145Q8NBT3 493 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 KREMEN2Q8NCW0 462 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 FLAD1Q8NFF5 587 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 NPLOC4Q8TAT6 608 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 FRS2Q8WU20 508 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 OSBP2Q969R2 916 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 C1orf159Q96HA4 380 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 CCDC140Q96MF4 163 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 IER2Q9BTL4 223 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 EEA1Q15075 1411 aa7.13□□□□□ -1.27
CD44-230ENST00000528922 PRODHO43272 600 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 DLX3O60479 287 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 FGFR1P11362 822 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 PLS3P13797 630 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 ATG4DQ86TL0 474 aaPredicted RBP7.12□□□□□ -1.27
CD44-230ENST00000528922 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 JMJD8Q96S16 334 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 KANSL2Q9H9L4 492 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 CLEC1BQ9P126 229 aa7.12□□□□□ -1.27
CD44-230ENST00000528922 TRAV20A0A0B4J274 112 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
CD44-230ENST00000528922 KCNJ6P48051 423 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 CHRNEQ04844 493 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 NR0B2Q15466 257 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 SLC35F1Q5T1Q4 408 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 CPNE8Q86YQ8 564 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 SPPL2CQ8IUH8 684 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 KSR1Q8IVT5 923 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 OXR1Q8N573 874 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 MYLIPQ8WY64 445 aa7.11□□□□□ -1.27
CD44-230ENST00000528922 CWC22Q9HCG8 908 aaKnown RBP7.11□□□□□ -1.27
CD44-230ENST00000528922 TMEFF2Q9UIK5 374 aaPredicted RBP7.11□□□□□ -1.27
CD44-230ENST00000528922 FITM1A5D6W6 292 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 PSPNO60542 156 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 TBC1D8O95759 1140 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 CPP00450 1065 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 PAMP19021 973 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 AFMP43652 599 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 RTP1P59025 263 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 MAP4K2Q12851 820 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 SLC14A2Q15849 920 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 HSF5Q4G112 596 aaPredicted RBP7.1□□□□□ -1.27
CD44-230ENST00000528922 FAM209AQ5JX71 171 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 HLA-DQA1Q5Y7H0 255 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 MBLAC2Q68D91 279 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 CYP2R1Q6VVX0 501 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 NSMFQ6X4W1 530 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 THAP3Q8WTV1 239 aaPredicted RBP7.1□□□□□ -1.27
CD44-230ENST00000528922 SHISA4Q96DD7 197 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 PLCD4Q9BRC7 762 aa7.1□□□□□ -1.27
CD44-230ENST00000528922 NPHP3-ACAD11A0A0J9YXS1 232 aa7.09□□□□□ -1.27
CD44-230ENST00000528922 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
CD44-230ENST00000528922 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
CD44-230ENST00000528922 NRDCO43847 1150 aa7.09□□□□□ -1.27
CD44-230ENST00000528922 PAPLNO95428 1278 aa7.09□□□□□ -1.27
CD44-230ENST00000528922 RAC2P15153 192 aa7.09□□□□□ -1.27
CD44-230ENST00000528922 ITGB5P18084 799 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms