RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 ABCB6Q9NP58 842 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 RAB21Q9UL25 225 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 SMCO2A6NFE2 343 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 MAP2K7O14733 419 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 TECP42680 631 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 HERVK_113P62684 666 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 GSTO1P78417 241 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 STK4Q13043 487 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 TSR1Q2NL82 804 aaKnown RBP21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 NEK11Q8NG66 645 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 ZMYND12Q9H0C1 365 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 HDAC6Q9UBN7 1215 aa21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 RTCBQ9Y3I0 505 aaKnown RBP21.13■□□□□ 0.97
TM9SF1-206ENST00000528669 LAD1O00515 517 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 RGL2O15211 777 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 MYL1P05976 194 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 FCER1AP12319 257 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 PRPHP41219 470 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 VSNL1P62760 191 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 ASIC1P78348 528 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 RC3H1Q5TC82 1133 aaKnown RBP21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 ANKRD40Q6AI12 368 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 HPS3Q969F9 1004 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 EYA3Q99504 573 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 TRIM9Q9C026 710 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 POTEB2H3BUK9 544 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 CDK8P49336 464 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 DNM2P50570 870 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 PPP4CP60510 307 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 PIP4K2BP78356 416 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 FAM182BQ5T319 152 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 RTFDC1Q9BY42 306 aaPredicted RBP21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 EXOC1Q9NV70 894 aa21.12■□□□□ 0.97
TM9SF1-206ENST00000528669 NKRFO15226 690 aaKnown RBP eCLIP21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 SRGNP10124 158 aa21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 BTDP43251 543 aa21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 NONOQ15233 471 aaKnown RBP eCLIP21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 HNRNPLLQ8WVV9 542 aaKnown RBP21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 P2RX5Q93086 422 aa21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 DHTKD1Q96HY7 919 aaPredicted RBP21.11■□□□□ 0.97
TM9SF1-206ENST00000528669 RASSF10A6NK89 507 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 TRIM21P19474 475 aaKnown RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 GRAPQ13588 217 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 CCDC122Q5T0U0 273 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 GRAPLQ8TC17 118 aaPredicted RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 CNOT6LQ96LI5 555 aaKnown RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 CCNL1Q9UK58 526 aaPredicted RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 LEMD3Q9Y2U8 911 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 TBC1D8BQ0IIM8 1120 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 KRT25Q7Z3Z0 450 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 ZNF804AQ7Z570 1209 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 LZTS2Q9BRK4 669 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 SPZ1Q9BXG8 430 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 HAUS4Q9H6D7 363 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 PDE11AQ9HCR9 933 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 BIN2Q9UBW5 565 aaPredicted RBP21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 SNED1Q8TER0 1413 aa21.1■□□□□ 0.97
TM9SF1-206ENST00000528669 CCNE1P24864 410 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 NEK8Q86SG6 692 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 PIGSQ96S52 555 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 UBA5Q9GZZ9 404 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 RNF216Q9NWF9 866 aaPredicted RBP21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 SRGAP2O75044 1071 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 ATP1A1P05023 1023 aaKnown RBP21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 LDHCP07864 332 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 MTIF2P46199 727 aaKnown RBP21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 TAF3Q5VWG9 929 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 HDXQ7Z353 690 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 TBCKQ8TEA7 893 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 AK8Q96MA6 479 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 C6orf50Q9HD87 102 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
TM9SF1-206ENST00000528669 ERLIN1O75477 346 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 NT5C2P49902 561 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 TRAPPC11Q7Z392 1133 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 KIAA1328Q86T90 577 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 TEX11Q8IYF3 940 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 NOC3LQ8WTT2 800 aaKnown RBP21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 RRP36Q96EU6 259 aaKnown RBP21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 CEP95Q96GE4 821 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 MMTAG2Q9BU76 263 aaKnown RBP21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 TTYH3Q9C0H2 523 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 CUEDC2Q9H467 287 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 L1RE1Q9UN81 338 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 CDK5RAP2Q96SN8 1893 aa21.08■□□□□ 0.97
TM9SF1-206ENST00000528669 SOGA3Q5TF21 947 aa21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 C16orf86Q6ZW13 317 aa21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 CCDC47Q96A33 483 aaKnown RBP21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 C7orf25Q9BPX7 421 aa21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 NOC4LQ9BVI4 516 aaKnown RBP21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.96
TM9SF1-206ENST00000528669 RCCD1A6NED2 376 aa21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 PSMD14O00487 310 aa21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 GNA11P29992 359 aa21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 TXKP42681 527 aa21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 SLC39A2Q9NP94 309 aa21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 DDX60LQ5H9U9 1706 aaKnown RBP21.07■□□□□ 0.96
TM9SF1-206ENST00000528669 BICDL2A1A5D9 508 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms