RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 RPAP3Q9H6T3 665 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 GBA2Q9HCG7 927 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 MYH9P35579 1960 aaKnown RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 FRMPD2Q68DX3 1309 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 GOLGA8HP0CJ92 632 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 STK3Q13188 491 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 MAP1SQ66K74 1059 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 CCDC84Q86UT8 332 aaPredicted RBP9.05□□□□□ -0.96
SORL1-207ENST00000528339 CPVLQ9H3G5 476 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 TXNRD2Q9NNW7 524 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 VAV3Q9UKW4 847 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 RIPK3Q9Y572 518 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 PTPRSQ13332 1948 aa9.05□□□□□ -0.96
SORL1-207ENST00000528339 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 DHX15O43143 795 aaKnown RBP9.04□□□□□ -0.96
SORL1-207ENST00000528339 MCM4P33991 863 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 SEMA3FQ13275 785 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 C17orf99Q6UX52 265 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 BLIDQ8IZY5 108 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 FAM133AQ8N9E0 248 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 TMEM174Q8WUU8 243 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 LEO1Q8WVC0 666 aaPredicted RBP9.04□□□□□ -0.96
SORL1-207ENST00000528339 CEP89Q96ST8 783 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 SLC26A6Q9BXS9 759 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 GLT8D2Q9H1C3 349 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 CABP5Q9NP86 173 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 UBIAD1Q9Y5Z9 338 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 TOMM70O94826 608 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 PTPREP23469 700 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 ICAM3P32942 547 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 FXR2P51116 673 aaKnown RBP eCLIP9.04□□□□□ -0.96
SORL1-207ENST00000528339 USP11P51784 963 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 RESP18Q5W5W9 173 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 ARL6IP4Q66PJ3 421 aaKnown RBP9.04□□□□□ -0.96
SORL1-207ENST00000528339 SMC1BQ8NDV3 1235 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 STBD1O95210 358 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 MUM1L1Q5H9M0 696 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 RRP36Q96EU6 259 aaKnown RBP9.04□□□□□ -0.96
SORL1-207ENST00000528339 USP28Q96RU2 1077 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 MMTAG2Q9BU76 263 aaKnown RBP9.04□□□□□ -0.96
SORL1-207ENST00000528339 CREBZFQ9NS37 354 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 FBXO28Q9NVF7 368 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 VPS54Q9P1Q0 977 aa9.04□□□□□ -0.96
SORL1-207ENST00000528339 COL4A6Q14031 1691 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 IGKV6D-21A0A0A0MT36 114 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 BTBD18B2RXH4 712 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 LAD1O00515 517 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 TBX3O15119 743 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 HOXC6P09630 235 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 CTGFP29279 349 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 EHHADHQ08426 723 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 NR5A1Q13285 461 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 LARP1BQ659C4 914 aaKnown RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.96
SORL1-207ENST00000528339 CALML3P27482 149 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 REM2Q8IYK8 340 aaPredicted RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 ZNF784Q8NCA9 323 aaPredicted RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 CHURC1Q8WUH1 139 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 SRPRBQ9Y5M8 271 aaKnown RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 BTBD19C9JJ37 291 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 KRT2P35908 639 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 SLC1A4P43007 532 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 GTF2A2P52657 109 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 GRB14Q14449 540 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 PCNX4Q63HM2 1172 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 XRRA1Q6P2D8 792 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 ARMC9Q7Z3E5 817 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 DIS3L2Q8IYB7 885 aaKnown RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 FMR1NBQ8N0W7 255 aaPredicted RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 C8orf76Q96K31 380 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 ASCC2Q9H1I8 757 aaPredicted RBP9.03□□□□□ -0.96
SORL1-207ENST00000528339 STX8Q9UNK0 236 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 CLIC4Q9Y696 253 aa9.03□□□□□ -0.96
SORL1-207ENST00000528339 ATG7O95352 703 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 COG2Q14746 738 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 RAB11FIP4Q86YS3 637 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 CCDC148Q8NFR7 591 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 SLC5A5Q92911 643 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 AMNQ9BXJ7 453 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 UBA5Q9GZZ9 404 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 GOLPH3LQ9H4A5 285 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 CYP39A1Q9NYL5 469 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 ZHX2Q9Y6X8 837 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 TMEM232C9JQI7 657 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 MRPS9P82933 396 aaKnown RBP9.02□□□□□ -0.97
SORL1-207ENST00000528339 SPP2Q13103 211 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 RILPL1Q5EBL4 403 aa9.02□□□□□ -0.97
SORL1-207ENST00000528339 SHC4Q6S5L8 630 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms