RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 RMND1Q9NWS8 449 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 BARHL2Q9NY43 387 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 VPS18Q9P253 973 aa8.36□□□□□ -1.07
C11orf54-207ENST00000528288 CTAGE15A4D2H0 777 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 UFL1O94874 794 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 CTAGE8P0CG41 777 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 IDEP14735 1019 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 RFC4P35249 363 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 LMAN1P49257 510 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 GPSM2P81274 684 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 RAD51AP2Q09MP3 1159 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 CTAGE6Q86UF2 777 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 DGKHQ86XP1 1220 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 CTAGE4Q8IX94 777 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 OR8K1Q8NGG5 319 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 NUDT12Q9BQG2 462 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 NYXQ9GZU5 481 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 SMARCAL1Q9NZC9 954 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 TTF2Q9UNY4 1162 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 A0A1B0GUL6 1792 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 POTEMA6NI47 508 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 LRRC10BA6NIK2 292 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 RASSF10A6NK89 507 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 M0R2N6 131 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 PSMA7O14818 248 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 SEMA3EO15041 775 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 DNA2P51530 1060 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 MAPK8IP2Q13387 824 aaPredicted RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 ARL6IP4Q66PJ3 421 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 ANKRD13CQ8N6S4 541 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 CNOT6LQ96LI5 555 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 MMS19Q96T76 1030 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 FAM207AQ9NSI2 230 aaPredicted RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 EXOC1Q9NV70 894 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 TBC1D7Q9P0N9 293 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 MYO6Q9UM54 1294 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 LGALS16A8MUM7 142 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 H7C1D1 291 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 EPHB6O15197 1021 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 RPS6KA4O75676 772 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 TDP2O95551 362 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 PCP11498 1178 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 CACNB1Q02641 598 aaPredicted RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 ENOX2Q16206 610 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 UBE2SQ16763 222 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 TTI2Q6NXR4 508 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 AMOTL1Q8IY63 956 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 TCP11L1Q9NUJ3 509 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
C11orf54-207ENST00000528288 ROBO1Q9Y6N7 1651 aa8.35□□□□□ -1.07
C11orf54-207ENST00000528288 SSBP05455 408 aaKnown RBP eCLIP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 CYP2C19P33261 490 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 SLC16A2P36021 539 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 SPAG1Q07617 926 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 SPTY2D1Q68D10 685 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 FAM196AQ6ZSG2 479 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 CEP112Q8N8E3 955 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 CCDC102AQ96A19 550 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 NOC4LQ9BVI4 516 aaKnown RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 PALM3A6NDB9 673 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 BAG3O95817 575 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 OR52Z1P0C646 297 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 MATR3P43243 847 aaKnown RBP eCLIP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 FAM193AP78312 1265 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 BEND6Q5SZJ8 279 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 ZNF507Q8TCN5 953 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 TRIM9Q9C026 710 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 POLD4Q9HCU8 107 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 KBTBD4Q9NVX7 518 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 ITIH6Q6UXX5 1313 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 SLC37A4O43826 429 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 TNNT3P45378 269 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 APBA1Q02410 837 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 STIM1Q13586 685 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 NONOQ15233 471 aaKnown RBP eCLIP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 MFSD14BQ5SR56 506 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 SOGA3Q5TF21 947 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 GIMAP8Q8ND71 665 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 MMTAG2Q9BU76 263 aaKnown RBP8.34□□□□□ -1.07
C11orf54-207ENST00000528288 FLT1P17948 1338 aa8.34□□□□□ -1.07
C11orf54-207ENST00000528288 C6orf229H3BNL8 230 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 CXCR5P32302 372 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 TNNI2P48788 182 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 TTBK2Q6IQ55 1244 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 CNBD1Q8NA66 436 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 KIAA0895Q8NCT3 520 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC148Q8NFR7 591 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 WDR66Q8TBY9 1149 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 RIN2Q8WYP3 895 aaPredicted RBP8.34□□□□□ -1.08
C11orf54-207ENST00000528288 P2RX5Q93086 422 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 JAKMIP2Q96AA8 810 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 CCDC51Q96ER9 411 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 RTFDC1Q9BY42 306 aaPredicted RBP8.34□□□□□ -1.08
C11orf54-207ENST00000528288 NHEJ1Q9H9Q4 299 aaPredicted RBP8.34□□□□□ -1.08
C11orf54-207ENST00000528288 EHD2Q9NZN4 543 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 FAN1Q9Y2M0 1017 aa8.34□□□□□ -1.08
C11orf54-207ENST00000528288 FAM196BA6NMK8 535 aa8.33□□□□□ -1.08
C11orf54-207ENST00000528288 SHROOM1Q2M3G4 852 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms