RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CTSWP56202 376 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 ANAPC15P60006 121 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 TFCP2Q12800 502 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 TXNRD1Q16881 649 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 PARP10Q53GL7 1025 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 PLEKHG4Q58EX7 1191 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 RNF187Q5TA31 235 aaPredicted RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 SAMD5Q5TGI4 173 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 PCNX4Q63HM2 1172 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 TPTE2Q6XPS3 522 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 DTHD1Q6ZMT9 781 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 SV2AQ7L0J3 742 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 ATG9AQ7Z3C6 839 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 AACSQ86V21 672 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 ERC1Q8IUD2 1116 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 MICAL1Q8TDZ2 1067 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 EAF2Q96CJ1 260 aaPredicted RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 CNTNAP3BQ96NU0 1288 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 DEPDC7Q96QD5 511 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 UTP14AQ9BVJ6 771 aaKnown RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 COL25A1Q9BXS0 654 aaPredicted RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 TRIM55Q9BYV6 548 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 CNTNAP3Q9BZ76 1288 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 PUS3Q9BZE2 481 aaKnown RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 ZCCHC2Q9C0B9 1178 aaKnown RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 CRISPLD1Q9H336 500 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 GREM2Q9H772 168 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 LIN7BQ9HAP6 207 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 BRD7Q9NPI1 651 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 TLR7Q9NYK1 1049 aaKnown RBP5.02□□□□□ -1.61
CD44-226ENST00000527889 PRKAG3Q9UGI9 489 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 STAP2Q9UGK3 403 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 HCN2Q9UL51 889 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 TLR6Q9Y2C9 796 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 LTBP1Q14766 1721 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 NAV1Q8NEY1 1877 aa5.02□□□□□ -1.61
CD44-226ENST00000527889 ADAMTSL1Q8N6G6 1762 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 AOX1Q06278 1338 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 USP42Q9H9J4 1324 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 EYA2O00167 538 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 MARCH6O60337 910 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 PDE8AO60658 829 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 MMP20O60882 483 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CDC45O75419 566 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 SASH3O75995 380 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CSF1RP07333 972 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 IFIT2P09913 472 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 MCCP23508 829 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 RFC4P35249 363 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CRKP46108 304 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 LMNB2Q03252 620 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CAMK2GQ13555 558 aaPredicted RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 ZNF827Q17R98 1081 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CCDC57Q2TAC2 916 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 TNNI3KQ59H18 835 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 TRAPPC3LQ5T215 181 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CLEC4GQ6UXB4 293 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CCNJLQ8IV13 435 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 SLITRK4Q8IW52 837 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 CLASRPQ8N2M8 674 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 TTLL11Q8NHH1 800 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 PI4K2BQ8TCG2 481 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 NKD1Q969G9 470 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 ANAPC16Q96DE5 110 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 SHDQ96IW2 340 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 ANP32EQ9BTT0 268 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 SRRTQ9BXP5 876 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 NUCKS1Q9H1E3 243 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 SEC31BQ9NQW1 1179 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 GJA3Q9Y6H8 435 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 FPGT-TNNI3KV9GXZ4 949 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 DICER1Q9UPY3 1922 aaKnown RBP5.01□□□□□ -1.61
CD44-226ENST00000527889 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
CD44-226ENST00000527889 SBF1O95248 1867 aa5□□□□□ -1.61
CD44-226ENST00000527889 ANKRD18BA2A2Z9 1011 aa5□□□□□ -1.61
CD44-226ENST00000527889 PHF20L1A8MW92 1017 aa5□□□□□ -1.61
CD44-226ENST00000527889 MAFGO15525 162 aa5□□□□□ -1.61
CD44-226ENST00000527889 YBX3P16989 372 aaKnown RBP eCLIP5□□□□□ -1.61
CD44-226ENST00000527889 TFE3P19532 575 aaPredicted RBP5□□□□□ -1.61
CD44-226ENST00000527889 IBSPP21815 317 aaPredicted RBP5□□□□□ -1.61
CD44-226ENST00000527889 TARSP26639 723 aaKnown RBP5□□□□□ -1.61
CD44-226ENST00000527889 ANP32AP39687 249 aaKnown RBP5□□□□□ -1.61
CD44-226ENST00000527889 IL15P40933 162 aaPredicted RBP5□□□□□ -1.61
CD44-226ENST00000527889 APOBRQ0VD83 1088 aa5□□□□□ -1.61
CD44-226ENST00000527889 IFIT5Q13325 482 aaKnown RBP5□□□□□ -1.61
CD44-226ENST00000527889 GRIN2CQ14957 1233 aa5□□□□□ -1.61
CD44-226ENST00000527889 HABP4Q5JVS0 413 aaKnown RBP5□□□□□ -1.61
CD44-226ENST00000527889 SNAP47Q5SQN1 464 aa5□□□□□ -1.61
CD44-226ENST00000527889 AGMOQ6ZNB7 445 aa5□□□□□ -1.61
CD44-226ENST00000527889 NOL8Q76FK4 1167 aaKnown RBP5□□□□□ -1.61
CD44-226ENST00000527889 NLRP8Q86W28 1048 aa5□□□□□ -1.61
CD44-226ENST00000527889 NBPF5PQ86XG9 351 aaPredicted RBP5□□□□□ -1.61
CD44-226ENST00000527889 GPATCH11Q8N954 259 aa5□□□□□ -1.61
CD44-226ENST00000527889 GOLM1Q8NBJ4 401 aa5□□□□□ -1.61
CD44-226ENST00000527889 CPLX3Q8WVH0 158 aa5□□□□□ -1.61
CD44-226ENST00000527889 RILPL2Q969X0 211 aa5□□□□□ -1.61
CD44-226ENST00000527889 DBNDD2Q9BQY9 259 aa5□□□□□ -1.61
CD44-226ENST00000527889 ZKSCAN3Q9BRR0 538 aa5□□□□□ -1.61
CD44-226ENST00000527889 GSX2Q9BZM3 304 aa5□□□□□ -1.61
CD44-226ENST00000527889 CEP44Q9C0F1 390 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms