RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 PLXNA3P51805 1871 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ZNF536O15090 1300 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ZNF521Q96K83 1311 aa5□□□□□ -1.61
CHD7-205ENST00000527825 COL11A1P12107 1806 aaPredicted RBP5□□□□□ -1.61
CHD7-205ENST00000527825 ZNF236Q9UL36 1845 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ACRP10323 421 aa5□□□□□ -1.61
CHD7-205ENST00000527825 SLC5A1P13866 664 aa5□□□□□ -1.61
CHD7-205ENST00000527825 GPC1P35052 558 aa5□□□□□ -1.61
CHD7-205ENST00000527825 RIPK4P57078 832 aa5□□□□□ -1.61
CHD7-205ENST00000527825 CCNA1P78396 465 aa5□□□□□ -1.61
CHD7-205ENST00000527825 SPP2Q13103 211 aa5□□□□□ -1.61
CHD7-205ENST00000527825 CLN3Q13286 438 aa5□□□□□ -1.61
CHD7-205ENST00000527825 IFIT5Q13325 482 aaKnown RBP5□□□□□ -1.61
CHD7-205ENST00000527825 LRRC41Q15345 812 aa5□□□□□ -1.61
CHD7-205ENST00000527825 CAVIN4Q5BKX8 364 aa5□□□□□ -1.61
CHD7-205ENST00000527825 MFSD5Q6N075 450 aa5□□□□□ -1.61
CHD7-205ENST00000527825 HHIPL2Q6UWX4 724 aa5□□□□□ -1.61
CHD7-205ENST00000527825 HFE2Q6ZVN8 426 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ZNF365Q70YC5 407 aa5□□□□□ -1.61
CHD7-205ENST00000527825 SUGP1Q8IWZ8 645 aaKnown RBP5□□□□□ -1.61
CHD7-205ENST00000527825 FAM178BQ8IXR5 827 aa5□□□□□ -1.61
CHD7-205ENST00000527825 PRSS33Q8NF86 280 aa5□□□□□ -1.61
CHD7-205ENST00000527825 GTF3C2Q8WUA4 911 aaPredicted RBP5□□□□□ -1.61
CHD7-205ENST00000527825 ATOH1Q92858 354 aaPredicted RBP5□□□□□ -1.61
CHD7-205ENST00000527825 COL26A1Q96A83 441 aa5□□□□□ -1.61
CHD7-205ENST00000527825 CALR3Q96L12 384 aaKnown RBP5□□□□□ -1.61
CHD7-205ENST00000527825 UCN2Q96RP3 112 aa5□□□□□ -1.61
CHD7-205ENST00000527825 UPF3BQ9BZI7 483 aaKnown RBP5□□□□□ -1.61
CHD7-205ENST00000527825 PHAXQ9H814 394 aaKnown RBP5□□□□□ -1.61
CHD7-205ENST00000527825 AS3MTQ9HBK9 375 aa5□□□□□ -1.61
CHD7-205ENST00000527825 CNNM1Q9NRU3 951 aa5□□□□□ -1.61
CHD7-205ENST00000527825 IQSEC3Q9UPP2 1182 aaPredicted RBP5□□□□□ -1.61
CHD7-205ENST00000527825 DAGLAQ9Y4D2 1042 aa5□□□□□ -1.61
CHD7-205ENST00000527825 MTCH2Q9Y6C9 303 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ZNF318Q5VUA4 2279 aa5□□□□□ -1.61
CHD7-205ENST00000527825 ZDBF2Q9HCK1 2354 aa5□□□□□ -1.61
CHD7-205ENST00000527825 REV3LO60673 3130 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 PHF20L1A8MW92 1017 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 RFXAPO00287 272 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 SEPT4O43236 478 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 RRP9O43818 475 aaKnown RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 LZTS3O60299 673 aaPredicted RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 FGBP02675 491 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 CSF2RAP15509 400 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 CYP2C19P33261 490 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 RABGGTBP53611 331 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 HERVK_113P62684 666 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 ERVK-24P63145 666 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 NCOA4Q13772 614 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 GAS6Q14393 721 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 EML3Q32P44 896 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 APOBEC3HQ6NTF7 200 aaKnown RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 LDHAL6AQ6ZMR3 332 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 TBC1D9Q6ZT07 1266 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 RNF180Q86T96 592 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 DPP9Q86TI2 863 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 CCDC84Q86UT8 332 aaPredicted RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 DEPDC4Q8N2C3 294 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 ZNF280CQ8ND82 737 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 EXOC6Q8TAG9 804 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 NUP133Q8WUM0 1156 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 USP6NLQ92738 828 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 ZNF837Q96EG3 531 aaPredicted RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 MRIQ9BWK5 157 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 ZMYND15Q9H091 742 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 CERS4Q9HA82 394 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 RAB6BQ9NRW1 208 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 USP40Q9NVE5 1235 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 FLRT1Q9NZU1 646 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 RCAN3Q9UKA8 241 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 FAM50BQ9Y247 325 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 YBX2Q9Y2T7 364 aaKnown RBP4.99□□□□□ -1.61
CHD7-205ENST00000527825 MAP3K2Q9Y2U5 619 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 PCDHA11Q9Y5I1 949 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 SLC4A7Q9Y6M7 1214 aa4.99□□□□□ -1.61
CHD7-205ENST00000527825 MROH7Q68CQ1 1323 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 SIP14410 1827 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 A0A1W2PQ45 241 aaPredicted RBP4.98□□□□□ -1.61
CHD7-205ENST00000527825 A0A1W2PQY0 241 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 SLC15A5A6NIM6 579 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 USP17L5A8MUK1 530 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 RNF225M0QZC1 329 aaPredicted RBP4.98□□□□□ -1.61
CHD7-205ENST00000527825 TLR3O15455 904 aaKnown RBP4.98□□□□□ -1.61
CHD7-205ENST00000527825 PEX10O60683 326 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 ARHGEF15O94989 841 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 RARBP10826 455 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 CYBAP13498 195 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 POU3F3P20264 500 aaPredicted RBP4.98□□□□□ -1.61
CHD7-205ENST00000527825 FAAP100Q0VG06 881 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 POU4F2Q12837 409 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 UBE4AQ14139 1066 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 GRIK5Q16478 980 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 PKN1Q16512 942 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 CCDC57Q2TAC2 916 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 CWF19L2Q2TBE0 894 aaKnown RBP4.98□□□□□ -1.61
CHD7-205ENST00000527825 C8orf34Q49A92 452 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 TMEM67Q5HYA8 995 aa4.98□□□□□ -1.61
CHD7-205ENST00000527825 DUSP27Q5VZP5 1158 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms