RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 RASA3Q14644 834 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 GOLGA5Q8TBA6 731 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 GTF3C2Q8WUA4 911 aaPredicted RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 FCER1AP12319 257 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 SEPT2Q15019 361 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 LRRIQ4A6NIV6 560 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 LAD1O00515 517 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 HUNKP57058 714 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 DGKHQ86XP1 1220 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 PLSCR1O15162 318 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 SLC7A3Q8WY07 619 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 TMEM110-MUSTN1A8MSY1 372 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 SH2B2O14492 632 aaPredicted RBP18.9■□□□□ 0.62
BEST1-203ENST00000524877 XPOTO43592 962 aaKnown RBP18.9■□□□□ 0.62
BEST1-203ENST00000524877 TNNI1P19237 187 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 VWA3BQ502W6 1294 aa18.9■□□□□ 0.62
BEST1-203ENST00000524877 RBM46Q8TBY0 533 aaKnown RBP18.9■□□□□ 0.62
BEST1-203ENST00000524877 TNPO2O14787 897 aaKnown RBP18.89■□□□□ 0.62
BEST1-203ENST00000524877 STAG1Q8WVM7 1258 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 RAVER2Q9HCJ3 691 aaKnown RBP18.89■□□□□ 0.61
BEST1-203ENST00000524877 CYP2D6P10635 497 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 STXBP2Q15833 593 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 Q3C1V9 767 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 RCSD1Q6JBY9 416 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 GBP3Q9H0R5 595 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 MMP14P50281 582 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 APOA5Q6Q788 366 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 HHIPL2Q6UWX4 724 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.89■□□□□ 0.61
BEST1-203ENST00000524877 ADARB2Q9NS39 739 aaKnown RBP18.89■□□□□ 0.61
BEST1-203ENST00000524877 RIPOR2Q9Y4F9 1068 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 ABCB11O95342 1321 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 PAK1Q13153 545 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 TAX1BP1Q86VP1 789 aa18.89■□□□□ 0.61
BEST1-203ENST00000524877 ZBTB12Q9Y330 459 aaPredicted RBP18.89■□□□□ 0.61
BEST1-203ENST00000524877 ENTPD3O75355 529 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 MCM3P25205 808 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 KMT5BQ4FZB7 885 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 LIN9Q5TKA1 542 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 NELFCDQ8IXH7 590 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 CSGALNACT2Q8N6G5 542 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 MED10Q9BTT4 135 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 ADCY5O95622 1261 aa18.88■□□□□ 0.61
BEST1-203ENST00000524877 SEC24BO95487 1268 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 CYP21A2P08686 494 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 NLRP7Q8WX94 980 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 FAM196BA6NMK8 535 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 CETPP11597 493 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 ELMSAN1Q6PJG2 1045 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 DCP1AQ9NPI6 582 aaPredicted RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 UBR1Q8IWV7 1749 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 GBP6Q6ZN66 633 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 CCDC50Q8IVM0 306 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 EZRP15311 586 aaKnown RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 ABCD1P33897 745 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 SNAP25P60880 206 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 TYRO3Q06418 890 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 RNF187Q5TA31 235 aaPredicted RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 SELENOOQ9BVL4 669 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 COL4A3BPQ9Y5P4 624 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 C19orf81C9J6K1 198 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 EIF2AK2P19525 551 aaKnown RBP18.87■□□□□ 0.61
BEST1-203ENST00000524877 KRT83P78385 493 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 DAGLAQ9Y4D2 1042 aa18.87■□□□□ 0.61
BEST1-203ENST00000524877 EPHX2P34913 555 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 LARSQ9P2J5 1176 aaKnown RBP18.86■□□□□ 0.61
BEST1-203ENST00000524877 TRAPPC10P48553 1259 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 MRPS9P82933 396 aaKnown RBP18.86■□□□□ 0.61
BEST1-203ENST00000524877 RABL6Q3YEC7 729 aaPredicted RBP18.86■□□□□ 0.61
BEST1-203ENST00000524877 DDX12PQ92771 950 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 RPAP3Q9H6T3 665 aaPredicted RBP18.86■□□□□ 0.61
BEST1-203ENST00000524877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.86■□□□□ 0.61
BEST1-203ENST00000524877 GNA14O95837 355 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 CSF1RP07333 972 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 CCDC42Q96M95 316 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 ZSWIM5Q9P217 1185 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 SERPINA10Q9UK55 444 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 TNFAIP3P21580 790 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 MYSM1Q5VVJ2 828 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 JADE2Q9NQC1 790 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 PANK4Q9NVE7 773 aa18.86■□□□□ 0.61
BEST1-203ENST00000524877 KDM6AO15550 1401 aaPredicted RBP18.86■□□□□ 0.61
BEST1-203ENST00000524877 SYNRGQ9UMZ2 1314 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 LONP1P36776 959 aaKnown RBP18.85■□□□□ 0.61
BEST1-203ENST00000524877 RNASELQ05823 741 aaKnown RBP18.85■□□□□ 0.61
BEST1-203ENST00000524877 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
BEST1-203ENST00000524877 PRPF3O43395 683 aaKnown RBP18.85■□□□□ 0.61
BEST1-203ENST00000524877 ZBED2Q9BTP6 218 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 CEMIPQ8WUJ3 1361 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 KIAA0753Q2KHM9 967 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 MYL5Q02045 173 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 TBC1D8BQ0IIM8 1120 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 POSTNQ15063 836 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 FAM178BQ8IXR5 827 aa18.85■□□□□ 0.61
BEST1-203ENST00000524877 ACAD9Q9H845 621 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms