RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 USP17L4A6NCW7 530 aa10□□□□□ -0.81
PKP3-202ENST00000524646 hCG_1984214I3L0E3 225 aa10□□□□□ -0.81
PKP3-202ENST00000524646 PSMD14O00487 310 aa10□□□□□ -0.81
PKP3-202ENST00000524646 CYTH3O43739 400 aa10□□□□□ -0.81
PKP3-202ENST00000524646 ZPR1O75312 459 aa10□□□□□ -0.81
PKP3-202ENST00000524646 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
PKP3-202ENST00000524646 CCNE1P24864 410 aa10□□□□□ -0.81
PKP3-202ENST00000524646 PMS1P54277 932 aaKnown RBP10□□□□□ -0.81
PKP3-202ENST00000524646 NAPAP54920 295 aa10□□□□□ -0.81
PKP3-202ENST00000524646 HERVK_113P62684 666 aa10□□□□□ -0.81
PKP3-202ENST00000524646 CKAP4Q07065 602 aaKnown RBP10□□□□□ -0.81
PKP3-202ENST00000524646 MEA1Q16626 185 aa10□□□□□ -0.81
PKP3-202ENST00000524646 SLC4A8Q2Y0W8 1093 aa10□□□□□ -0.81
PKP3-202ENST00000524646 TPTE2Q6XPS3 522 aa10□□□□□ -0.81
PKP3-202ENST00000524646 C16orf86Q6ZW13 317 aa10□□□□□ -0.81
PKP3-202ENST00000524646 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
PKP3-202ENST00000524646 TXLNBQ8N3L3 684 aa10□□□□□ -0.81
PKP3-202ENST00000524646 ZNF713Q8N859 430 aaPredicted RBP10□□□□□ -0.81
PKP3-202ENST00000524646 RETREG2Q8NC44 543 aa10□□□□□ -0.81
PKP3-202ENST00000524646 SLC44A5Q8NCS7 719 aa10□□□□□ -0.81
PKP3-202ENST00000524646 LRRC15Q8TF66 581 aa10□□□□□ -0.81
PKP3-202ENST00000524646 P2RX5Q93086 422 aa10□□□□□ -0.81
PKP3-202ENST00000524646 IQCDQ96DY2 449 aa10□□□□□ -0.81
PKP3-202ENST00000524646 CNOT6LQ96LI5 555 aaKnown RBP10□□□□□ -0.81
PKP3-202ENST00000524646 PNKPQ96T60 521 aa10□□□□□ -0.81
PKP3-202ENST00000524646 TMEM47Q9BQJ4 181 aa10□□□□□ -0.81
PKP3-202ENST00000524646 NUP58Q9BVL2 599 aa10□□□□□ -0.81
PKP3-202ENST00000524646 TTYH3Q9C0H2 523 aa10□□□□□ -0.81
PKP3-202ENST00000524646 ZMYND12Q9H0C1 365 aa10□□□□□ -0.81
PKP3-202ENST00000524646 ZSWIM4Q9H7M6 989 aa10□□□□□ -0.81
PKP3-202ENST00000524646 CALCOCO1Q9P1Z2 691 aa10□□□□□ -0.81
PKP3-202ENST00000524646 MAPK8IP1Q9UQF2 711 aa10□□□□□ -0.81
PKP3-202ENST00000524646 LUC7L2Q9Y383 392 aaKnown RBP10□□□□□ -0.81
PKP3-202ENST00000524646 EPN1Q9Y6I3 576 aaPredicted RBP10□□□□□ -0.81
PKP3-202ENST00000524646 MYH10P35580 1976 aa10□□□□□ -0.81
PKP3-202ENST00000524646 ERICH4A6NGS2 130 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 PLCG2P16885 1265 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 SMARCA1P28370 1054 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 TM4SF1P30408 202 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 HOXA7P31268 230 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 ASIC1P78348 528 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 GPS2Q13227 327 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 DIXDC1Q155Q3 683 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 BEND6Q5SZJ8 279 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 HDXQ7Z353 690 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 TRAPPC11Q7Z392 1133 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 NEK8Q86SG6 692 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 CSGALNACT2Q8N6G5 542 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 NEDD1Q8NHV4 660 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 JAKMIP2Q96AA8 810 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 DUSP9Q99956 384 aaKnown RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 C7orf25Q9BPX7 421 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 TRIM9Q9C026 710 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 C6orf50Q9HD87 102 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 STK17AQ9UEE5 414 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 MYO6Q9UM54 1294 aa9.99□□□□□ -0.81
PKP3-202ENST00000524646 COL11A2P13942 1736 aaPredicted RBP9.99□□□□□ -0.81
PKP3-202ENST00000524646 A0A1W2PQJ5 194 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 ANO9A1A5B4 782 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 NUTM2BA6NNL0 878 aaPredicted RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 NUTM2EB1AL46 878 aaPredicted RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 B4DLN1 442 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 KLRF2D3W0D1 207 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 H3BQF6 201 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 GNA11P29992 359 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 BTDP43251 543 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 KRT83P78385 493 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 ZBED6P86452 979 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 CDK17Q00537 523 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 PDE4DQ08499 809 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 VPS72Q15906 364 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 GRIK5Q16478 980 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 FAM98CQ17RN3 349 aaKnown RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 FIGNQ5HY92 759 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 SOGA3Q5TF21 947 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 CNNM4Q6P4Q7 775 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 KIAA1328Q86T90 577 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 MAPKAPK5Q8IW41 473 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 TEX11Q8IYF3 940 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 TGFBRAP1Q8WUH2 860 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 RRP36Q96EU6 259 aaKnown RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 ERGIC2Q96RQ1 377 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 EYA3Q99504 573 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 CHP1Q99653 195 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 ACBD3Q9H3P7 528 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 SEC63Q9UGP8 760 aaKnown RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 SAP30BPQ9UHR5 308 aaKnown RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 RTCBQ9Y3I0 505 aaKnown RBP9.98□□□□□ -0.81
PKP3-202ENST00000524646 GAKO14976 1311 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 ABCB11O95342 1321 aa9.98□□□□□ -0.81
PKP3-202ENST00000524646 LOXHD1Q8IVV2 1947 aa9.97□□□□□ -0.81
PKP3-202ENST00000524646 RBBP6Q7Z6E9 1792 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 PES1O00541 588 aaKnown RBP9.97□□□□□ -0.81
PKP3-202ENST00000524646 IPO7O95373 1038 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms