RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
SPARC-206ENST00000524277 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 ADD3Q9UEY8 706 aaKnown RBP13.97□□□□□ -0.17
SPARC-206ENST00000524277 CCPG1Q9ULG6 757 aa13.97□□□□□ -0.17
SPARC-206ENST00000524277 LAMA2P24043 3122 aaKnown RBP13.97□□□□□ -0.17
SPARC-206ENST00000524277 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 SOWAHBA6NEL2 793 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 HSPD1P10809 573 aaKnown RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 ITGB8P26012 769 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 CCDC178Q5BJE1 867 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 TMEM199Q8N511 208 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 MPHOSPH6Q99547 160 aaKnown RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 MAF1Q9H063 256 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 RANBP17Q9H2T7 1088 aaKnown RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 VTA1Q9NP79 307 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 CYP39A1Q9NYL5 469 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 TBX21Q9UL17 535 aa13.96□□□□□ -0.17
SPARC-206ENST00000524277 GNEQ9Y223 722 aaKnown RBP13.96□□□□□ -0.17
SPARC-206ENST00000524277 CUL9Q8IWT3 2517 aa13.96□□□□□ -0.18
SPARC-206ENST00000524277 MYADML2A6NDP7 307 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 NMT2O60551 498 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 SYDE2Q5VT97 1194 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 MFSD6Q6ZSS7 791 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 MORC4Q8TE76 937 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 INCENPQ9NQS7 918 aa13.95□□□□□ -0.18
SPARC-206ENST00000524277 CCDC171Q6TFL3 1326 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 A0A0D9SFI3 127 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 B4DLN1 442 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 CTAGE5O15320 804 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 ADCY6O43306 1168 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 MRPL12P52815 198 aaKnown RBP13.94□□□□□ -0.18
SPARC-206ENST00000524277 FSCN1Q16658 493 aaKnown RBP13.94□□□□□ -0.18
SPARC-206ENST00000524277 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 NSMFQ6X4W1 530 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 SMC5Q8IY18 1101 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 FAM227BQ96M60 508 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
SPARC-206ENST00000524277 CDX2Q99626 313 aaPredicted RBP13.94□□□□□ -0.18
SPARC-206ENST00000524277 HIP1O00291 1037 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 DYNC1LI2O43237 492 aaPredicted RBP13.93□□□□□ -0.18
SPARC-206ENST00000524277 NMIQ13287 307 aaPredicted RBP13.93□□□□□ -0.18
SPARC-206ENST00000524277 MUM1L1Q5H9M0 696 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
SPARC-206ENST00000524277 GPATCH4Q5T3I0 446 aaKnown RBP13.93□□□□□ -0.18
SPARC-206ENST00000524277 TAPT1Q6NXT6 567 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
SPARC-206ENST00000524277 TLK2Q86UE8 772 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 DGKHQ86XP1 1220 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 FAM126BQ8IXS8 530 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 ESR2Q92731 530 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
SPARC-206ENST00000524277 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.92□□□□□ -0.18
SPARC-206ENST00000524277 CD4P01730 458 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 SMPD1P17405 629 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 EPHB4P54760 987 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 BRDTQ58F21 947 aaPredicted RBP13.92□□□□□ -0.18
SPARC-206ENST00000524277 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
SPARC-206ENST00000524277 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 DNERQ8NFT8 737 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 MTIF3Q9H2K0 278 aaKnown RBP13.92□□□□□ -0.18
SPARC-206ENST00000524277 MTMR7Q9Y216 660 aa13.92□□□□□ -0.18
SPARC-206ENST00000524277 MCM3APO60318 1980 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 RBM47A0AV96 593 aaKnown RBP13.91□□□□□ -0.18
SPARC-206ENST00000524277 ZNF213O14771 459 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPARC-206ENST00000524277 SNHG28P0DPA3 235 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 PDHBP11177 359 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 SDSP20132 328 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 SLC16A2P36021 539 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 ALDH5A1P51649 535 aaPredicted RBP13.91□□□□□ -0.18
SPARC-206ENST00000524277 SNAP25P60880 206 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 BEX3Q00994 111 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 ZNF543Q08ER8 600 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 ITGA7Q13683 1181 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 BAATQ14032 418 aaPredicted RBP13.91□□□□□ -0.18
SPARC-206ENST00000524277 TMEM240Q5SV17 173 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 CXCL17Q6UXB2 119 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 ZNF589Q86UQ0 364 aaPredicted RBP13.91□□□□□ -0.18
SPARC-206ENST00000524277 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 IQCA1Q86XH1 822 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 CHMP4CQ96CF2 233 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
SPARC-206ENST00000524277 TTYH1Q9H313 450 aaPredicted RBP13.91□□□□□ -0.18
SPARC-206ENST00000524277 POLR3EQ9NVU0 708 aa13.91□□□□□ -0.18
SPARC-206ENST00000524277 ASTN1O14525 1302 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 PTPDC1A2A3K4 754 aa13.9□□□□□ -0.18
SPARC-206ENST00000524277 KPNA6O60684 536 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms